STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKE09198.1Muraminidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (146 aa)    
Predicted Functional Partners:
AKE09197.1
Holin; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
AKE09199.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
AKE10951.1
Tail protein X; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.595
AKE10948.1
Capsid protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.592
AKE10950.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.591
AKE10947.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.590
AKE10954.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.589
AKE10957.1
Baseplate assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.583
AKE10966.1
Tail assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.582
AKE10964.1
Mu-like prophage FluMu gp41 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.577
Your Current Organism:
Serratia liquefaciens
NCBI taxonomy Id: 614
Other names: ATCC 27592, Aerobacter liquefaciens, CCUG 9285, CIP 103238, DSM 4487, LMG 7884, LMG:7884, NCTC 12962, S. liquefaciens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.