STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BB559_004543Uncharacterized protein. (919 aa)    
Predicted Functional Partners:
BB559_005029
Uncharacterized protein.
   
 0.967
BB559_003327
Uncharacterized protein.
    
 0.952
BB559_000073
RPOLD domain-containing protein.
   
 0.951
BB559_000221
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
 0.936
BB559_000396
Uncharacterized protein.
    
 
 0.928
BB559_003718
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.921
BB559_001219
Uncharacterized protein.
    
 
 0.915
BB559_007467
TAF domain-containing protein.
    
 0.914
BB559_001234
Uncharacterized protein.
    
  0.895
BB559_001321
TAFII55_N domain-containing protein.
    
 
 0.891
Your Current Organism:
Furculomyces boomerangus
NCBI taxonomy Id: 61424
Other names: F. boomerangus
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