STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BB559_002199Fcf2 domain-containing protein. (216 aa)    
Predicted Functional Partners:
BB559_002892
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
   
 
 0.992
BB559_007372
Uncharacterized protein.
   
 
 0.990
BB559_004368
Sas10 domain-containing protein.
   
 
 0.990
BB559_002147
Brix domain-containing protein.
   
   0.989
BB559_001771
Uncharacterized protein.
   
 
 0.986
BB559_003157
WD_REPEATS_REGION domain-containing protein.
   
 
 0.985
BB559_001967
Uncharacterized protein.
   
 
 0.983
BB559_000192
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 
 0.982
BB559_003963
Nop domain-containing protein.
   
 
 0.980
BB559_005396
NUC153 domain-containing protein.
   
 
 0.978
Your Current Organism:
Furculomyces boomerangus
NCBI taxonomy Id: 61424
Other names: F. boomerangus
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