BB559_001978 protein (Furculomyces boomerangus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

BB559_001978

Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (410 aa)

Predicted Functional Partners:

BB559_005773

0.908

BB559_002191

0.903

BB559_000741

0.871

BB559_006853

0.870

BB559_006432

0.870

BB559_002348

0.870

BB559_001091

0.850

BB559_001075

0.850

BB559_006198

0.846

BB559_004004

0.846

Your Current Organism:

Furculomyces boomerangus

NCBI taxonomy Id: 61424
Other names: F. boomerangus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BB559_000741	BB559_001075	A0A2T9Z493	A0A2T9Z349	Uncharacterized protein.	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	0.856
BB559_000741	BB559_001091	A0A2T9Z493	A0A2T9Z062	Uncharacterized protein.	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	0.856
BB559_000741	BB559_001978	A0A2T9Z493	A0A2T9YZ17	Uncharacterized protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.871
BB559_000741	BB559_002191	A0A2T9Z493	A0A2T9YX97	Uncharacterized protein.	Uncharacterized protein.	0.783
BB559_000741	BB559_002348	A0A2T9Z493	A0A2T9YW33	Uncharacterized protein.	HMG_CoA_synt_C domain-containing protein.	0.616
BB559_000741	BB559_004004	A0A2T9Z493	A0A2T9YHB3	Uncharacterized protein.	Uncharacterized protein.	0.945
BB559_000741	BB559_005773	A0A2T9Z493	A0A2T9Y6Q2	Uncharacterized protein.	Uncharacterized protein.	0.783
BB559_000741	BB559_006198	A0A2T9Z493	A0A2T9Y478	Uncharacterized protein.	Uncharacterized protein.	0.945
BB559_000741	BB559_006432	A0A2T9Z493	A0A2T9Y346	Uncharacterized protein.	3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.	0.616
BB559_000741	BB559_006853	A0A2T9Z493	A0A2T9Y043	Uncharacterized protein.	Uncharacterized protein.	0.616
BB559_001075	BB559_000741	A0A2T9Z349	A0A2T9Z493	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	Uncharacterized protein.	0.856
BB559_001075	BB559_001978	A0A2T9Z349	A0A2T9YZ17	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.850
BB559_001075	BB559_002191	A0A2T9Z349	A0A2T9YX97	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	Uncharacterized protein.	0.915
BB559_001075	BB559_002348	A0A2T9Z349	A0A2T9YW33	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	HMG_CoA_synt_C domain-containing protein.	0.603
BB559_001075	BB559_004004	A0A2T9Z349	A0A2T9YHB3	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	Uncharacterized protein.	0.894
BB559_001075	BB559_005773	A0A2T9Z349	A0A2T9Y6Q2	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	Uncharacterized protein.	0.974
BB559_001075	BB559_006198	A0A2T9Z349	A0A2T9Y478	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	Uncharacterized protein.	0.894
BB559_001075	BB559_006432	A0A2T9Z349	A0A2T9Y346	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.	0.603
BB559_001075	BB559_006853	A0A2T9Z349	A0A2T9Y043	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	Uncharacterized protein.	0.603
BB559_001091	BB559_000741	A0A2T9Z062	A0A2T9Z493	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	Uncharacterized protein.	0.856