BB559_001995 protein (Furculomyces boomerangus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

BB559_001995

GOLD domain-containing protein. (194 aa)

Predicted Functional Partners:

BB559_004626

0.997

BB559_003402

0.992

BB559_005786

0.936

BB559_003713

0.935

BB559_001489

0.874

BB559_004790

0.852

BB559_001120

0.847

BB559_003544

0.802

BB559_000897

0.799

BB559_002606

0.795

Your Current Organism:

Furculomyces boomerangus

NCBI taxonomy Id: 61424
Other names: F. boomerangus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BB559_000897	BB559_001120	A0A2T9Z3R1	A0A2T9YAS4	Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.	0.560
BB559_000897	BB559_001489	A0A2T9Z3R1	A0A2T9Z1S5	Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.	Uncharacterized protein.	0.699
BB559_000897	BB559_001995	A0A2T9Z3R1	A0A2T9YZ52	Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.	GOLD domain-containing protein.	0.799
BB559_000897	BB559_003402	A0A2T9Z3R1	A0A2T9YLE0	Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.	GOLD domain-containing protein.	0.719
BB559_000897	BB559_003544	A0A2T9Z3R1	A0A2T9XZ91	Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.	Uncharacterized protein.	0.419
BB559_000897	BB559_004626	A0A2T9Z3R1	A0A2T9YDM3	Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.	C2H2-type domain-containing protein.	0.875
BB559_000897	BB559_004790	A0A2T9Z3R1	A0A2T9YCT5	Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.595
BB559_001120	BB559_000897	A0A2T9YAS4	A0A2T9Z3R1	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.	Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.	0.560
BB559_001120	BB559_001995	A0A2T9YAS4	A0A2T9YZ52	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.	GOLD domain-containing protein.	0.847
BB559_001120	BB559_002606	A0A2T9YAS4	A0A2T9YTY8	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.	Uncharacterized protein.	0.717
BB559_001120	BB559_003544	A0A2T9YAS4	A0A2T9XZ91	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.	Uncharacterized protein.	0.992
BB559_001120	BB559_004626	A0A2T9YAS4	A0A2T9YDM3	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.	C2H2-type domain-containing protein.	0.827
BB559_001120	BB559_004790	A0A2T9YAS4	A0A2T9YCT5	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.991
BB559_001489	BB559_000897	A0A2T9Z1S5	A0A2T9Z3R1	Uncharacterized protein.	Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.	0.699
BB559_001489	BB559_001995	A0A2T9Z1S5	A0A2T9YZ52	Uncharacterized protein.	GOLD domain-containing protein.	0.874
BB559_001489	BB559_002606	A0A2T9Z1S5	A0A2T9YTY8	Uncharacterized protein.	Uncharacterized protein.	0.454
BB559_001489	BB559_003402	A0A2T9Z1S5	A0A2T9YLE0	Uncharacterized protein.	GOLD domain-containing protein.	0.879
BB559_001489	BB559_003713	A0A2T9Z1S5	A0A2T9YJD5	Uncharacterized protein.	Uncharacterized protein.	0.771
BB559_001489	BB559_004626	A0A2T9Z1S5	A0A2T9YDM3	Uncharacterized protein.	C2H2-type domain-containing protein.	0.862
BB559_001489	BB559_004790	A0A2T9Z1S5	A0A2T9YCT5	Uncharacterized protein.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.407