STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BB559_001778Uncharacterized protein. (441 aa)    
Predicted Functional Partners:
BB559_005486
Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily.
    
 0.988
BB559_006635
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
   
 0.948
BB559_004949
Golgi apparatus membrane protein TVP23; Golgi membrane protein involved in vesicular trafficking. Belongs to the TVP23 family.
    
   0.936
BB559_006717
Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
    
 0.779
BB559_005955
Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
    
 0.779
BB559_004294
DUF676 domain-containing protein.
    
 0.779
BB559_005186
Uncharacterized protein.
    
 0.779
BB559_002939
Uncharacterized protein.
    
 0.779
BB559_000346
Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
    
 0.779
BB559_006069
Lipase_3 domain-containing protein.
   
 
 0.709
Your Current Organism:
Furculomyces boomerangus
NCBI taxonomy Id: 61424
Other names: F. boomerangus
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