STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BB559_000873tRNA (guanine(26)-N(2))-dimethyltransferase. (488 aa)    
Predicted Functional Partners:
BB559_006336
WD_REPEATS_REGION domain-containing protein.
   
    0.833
BB559_003466
SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
 
 0.737
BB559_005541
SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
 
 0.736
BB559_001931
Brix domain-containing protein.
   
  
 0.709
BB559_000511
TruB_N domain-containing protein.
   
 
 0.689
TRM8
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
   
 
 0.686
BB559_001715
WD_REPEATS_REGION domain-containing protein.
   
    0.685
BB559_000774
Uncharacterized protein.
   
  
 0.681
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
    0.658
BB559_000787
Uncharacterized protein.
   
    0.648
Your Current Organism:
Furculomyces boomerangus
NCBI taxonomy Id: 61424
Other names: F. boomerangus
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