Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BB559_000511 | BB559_000774 | A0A2T9Z4Y2 | A0A2T9Z443 | TruB_N domain-containing protein. | Uncharacterized protein. | 0.572 |
BB559_000511 | BB559_000787 | A0A2T9Z4Y2 | A0A2T9Z433 | TruB_N domain-containing protein. | Uncharacterized protein. | 0.773 |
BB559_000511 | BB559_000873 | A0A2T9Z4Y2 | A0A2T9Z3T4 | TruB_N domain-containing protein. | tRNA (guanine(26)-N(2))-dimethyltransferase. | 0.689 |
BB559_000511 | BB559_001931 | A0A2T9Z4Y2 | A0A2T9YZN5 | TruB_N domain-containing protein. | Brix domain-containing protein. | 0.724 |
BB559_000511 | BB559_003466 | A0A2T9Z4Y2 | A0A2T9YL68 | TruB_N domain-containing protein. | SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.629 |
BB559_000511 | BB559_005541 | A0A2T9Z4Y2 | A0A2T9Y834 | TruB_N domain-containing protein. | SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.531 |
BB559_000511 | BB559_006336 | A0A2T9Z4Y2 | A0A2T9Y3H8 | TruB_N domain-containing protein. | WD_REPEATS_REGION domain-containing protein. | 0.587 |
BB559_000511 | ERB1 | A0A2T9Z4Y2 | A0A2T9YRZ4 | TruB_N domain-containing protein. | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.837 |
BB559_000511 | TRM8 | A0A2T9Z4Y2 | A0A2T9YNT8 | TruB_N domain-containing protein. | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.794 |
BB559_000774 | BB559_000511 | A0A2T9Z443 | A0A2T9Z4Y2 | Uncharacterized protein. | TruB_N domain-containing protein. | 0.572 |
BB559_000774 | BB559_000787 | A0A2T9Z443 | A0A2T9Z433 | Uncharacterized protein. | Uncharacterized protein. | 0.475 |
BB559_000774 | BB559_000873 | A0A2T9Z443 | A0A2T9Z3T4 | Uncharacterized protein. | tRNA (guanine(26)-N(2))-dimethyltransferase. | 0.681 |
BB559_000774 | BB559_001715 | A0A2T9Z443 | A0A2T9Z0U0 | Uncharacterized protein. | WD_REPEATS_REGION domain-containing protein. | 0.491 |
BB559_000774 | BB559_001931 | A0A2T9Z443 | A0A2T9YZN5 | Uncharacterized protein. | Brix domain-containing protein. | 0.772 |
BB559_000774 | BB559_003466 | A0A2T9Z443 | A0A2T9YL68 | Uncharacterized protein. | SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.491 |
BB559_000774 | BB559_005541 | A0A2T9Z443 | A0A2T9Y834 | Uncharacterized protein. | SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.595 |
BB559_000774 | BB559_006336 | A0A2T9Z443 | A0A2T9Y3H8 | Uncharacterized protein. | WD_REPEATS_REGION domain-containing protein. | 0.651 |
BB559_000774 | ERB1 | A0A2T9Z443 | A0A2T9YRZ4 | Uncharacterized protein. | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.629 |
BB559_000774 | TRM8 | A0A2T9Z443 | A0A2T9YNT8 | Uncharacterized protein. | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.754 |
BB559_000787 | BB559_000511 | A0A2T9Z433 | A0A2T9Z4Y2 | Uncharacterized protein. | TruB_N domain-containing protein. | 0.773 |
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