Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BB559_000137 | BB559_000510 | A0A2T9Z636 | A0A2T9Z4Z6 | Uncharacterized protein. | Uncharacterized protein. | 0.973 |
BB559_000137 | BB559_000524 | A0A2T9Z636 | A0A2T9Z4W3 | Uncharacterized protein. | Uncharacterized protein; Belongs to the cyclin family. | 0.961 |
BB559_000137 | BB559_000584 | A0A2T9Z636 | A0A2T9Z4Q2 | Uncharacterized protein. | Uncharacterized protein. | 0.995 |
BB559_000137 | BB559_000745 | A0A2T9Z636 | A0A2T9Z499 | Uncharacterized protein. | Uncharacterized protein. | 0.920 |
BB559_000137 | BB559_000971 | A0A2T9Z636 | A0A2T9Z3H6 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.996 |
BB559_000137 | BB559_001807 | A0A2T9Z636 | A0A2T9Z0D6 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 7; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. | 0.996 |
BB559_000137 | BB559_004414 | A0A2T9Z636 | A0A2T9YET4 | Uncharacterized protein. | Uncharacterized protein. | 0.980 |
BB559_000137 | MED18 | A0A2T9Z636 | A0A2T9YR40 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 18; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.995 |
BB559_000137 | MED4 | A0A2T9Z636 | A0A2T9Z6B9 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 4; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.991 |
BB559_000137 | MED6 | A0A2T9Z636 | A0A2T9YV60 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.996 |
BB559_000510 | BB559_000137 | A0A2T9Z4Z6 | A0A2T9Z636 | Uncharacterized protein. | Uncharacterized protein. | 0.973 |
BB559_000510 | BB559_000524 | A0A2T9Z4Z6 | A0A2T9Z4W3 | Uncharacterized protein. | Uncharacterized protein; Belongs to the cyclin family. | 0.984 |
BB559_000510 | BB559_000584 | A0A2T9Z4Z6 | A0A2T9Z4Q2 | Uncharacterized protein. | Uncharacterized protein. | 0.962 |
BB559_000510 | BB559_000745 | A0A2T9Z4Z6 | A0A2T9Z499 | Uncharacterized protein. | Uncharacterized protein. | 0.891 |
BB559_000510 | BB559_000971 | A0A2T9Z4Z6 | A0A2T9Z3H6 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.979 |
BB559_000510 | BB559_001807 | A0A2T9Z4Z6 | A0A2T9Z0D6 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 7; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. | 0.897 |
BB559_000510 | BB559_004414 | A0A2T9Z4Z6 | A0A2T9YET4 | Uncharacterized protein. | Uncharacterized protein. | 0.980 |
BB559_000510 | MED18 | A0A2T9Z4Z6 | A0A2T9YR40 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 18; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.966 |
BB559_000510 | MED4 | A0A2T9Z4Z6 | A0A2T9Z6B9 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 4; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.875 |
BB559_000510 | MED6 | A0A2T9Z4Z6 | A0A2T9YV60 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.973 |
page 1 of 6