node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDX67270.1 | rph | SAMN05421644_10936 | SAMN05421644_11651 | XTP/dITP diphosphohydrolase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.980 |
SDX67423.1 | SDX81262.1 | SAMN05421644_10941 | SAMN05421644_11447 | ATP-dependent helicase HrpB. | Small subunit ribosomal protein S1. | 0.946 |
SDX67423.1 | SDY10907.1 | SAMN05421644_10941 | SAMN05421644_13011 | ATP-dependent helicase HrpB. | PELOTA RNA binding domain-containing protein. | 0.670 |
SDX67423.1 | SDY24224.1 | SAMN05421644_10941 | SAMN05421644_14116 | ATP-dependent helicase HrpB. | Small subunit ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 0.953 |
SDX67423.1 | rph | SAMN05421644_10941 | SAMN05421644_11651 | ATP-dependent helicase HrpB. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.920 |
SDX67423.1 | rpsD | SAMN05421644_10941 | SAMN05421644_10592 | ATP-dependent helicase HrpB. | Small subunit ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.974 |
SDX67423.1 | rpsK | SAMN05421644_10941 | SAMN05421644_10591 | ATP-dependent helicase HrpB. | Small subunit ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.960 |
SDX81262.1 | SDX67423.1 | SAMN05421644_11447 | SAMN05421644_10941 | Small subunit ribosomal protein S1. | ATP-dependent helicase HrpB. | 0.946 |
SDX81262.1 | SDY10907.1 | SAMN05421644_11447 | SAMN05421644_13011 | Small subunit ribosomal protein S1. | PELOTA RNA binding domain-containing protein. | 0.906 |
SDX81262.1 | SDY24224.1 | SAMN05421644_11447 | SAMN05421644_14116 | Small subunit ribosomal protein S1. | Small subunit ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 0.860 |
SDX81262.1 | SDY32405.1 | SAMN05421644_11447 | SAMN05421644_14915 | Small subunit ribosomal protein S1. | Exoribonuclease-2. | 0.645 |
SDX81262.1 | rnr | SAMN05421644_11447 | SAMN05421644_1636 | Small subunit ribosomal protein S1. | Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | 0.645 |
SDX81262.1 | rph | SAMN05421644_11447 | SAMN05421644_11651 | Small subunit ribosomal protein S1. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.930 |
SDX81262.1 | rpsD | SAMN05421644_11447 | SAMN05421644_10592 | Small subunit ribosomal protein S1. | Small subunit ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.998 |
SDX81262.1 | rpsK | SAMN05421644_11447 | SAMN05421644_10591 | Small subunit ribosomal protein S1. | Small subunit ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.998 |
SDY10907.1 | SDX67423.1 | SAMN05421644_13011 | SAMN05421644_10941 | PELOTA RNA binding domain-containing protein. | ATP-dependent helicase HrpB. | 0.670 |
SDY10907.1 | SDX81262.1 | SAMN05421644_13011 | SAMN05421644_11447 | PELOTA RNA binding domain-containing protein. | Small subunit ribosomal protein S1. | 0.906 |
SDY10907.1 | SDY24224.1 | SAMN05421644_13011 | SAMN05421644_14116 | PELOTA RNA binding domain-containing protein. | Small subunit ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 0.906 |
SDY10907.1 | SDY32405.1 | SAMN05421644_13011 | SAMN05421644_14915 | PELOTA RNA binding domain-containing protein. | Exoribonuclease-2. | 0.873 |
SDY10907.1 | rnr | SAMN05421644_13011 | SAMN05421644_1636 | PELOTA RNA binding domain-containing protein. | Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | 0.873 |