STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY06475.1RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (364 aa)    
Predicted Functional Partners:
SDY06503.1
Multidrug efflux pump subunit AcrB; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.994
SDX78703.1
Outer membrane protein.
 
 0.973
SDX49287.1
Multidrug efflux pump subunit AcrB; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.970
SDX90676.1
Multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.970
SDX97435.1
Multidrug efflux pump.
 
 0.940
SDX38359.1
Multidrug efflux pump subunit AcrB; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.855
SDX58957.1
Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  
 
0.850
SDY03739.1
Hypothetical protein.
  
 0.771
SDY03767.1
Outer membrane protein TolC.
  
 0.771
SDX91408.1
Putative ABC transport system ATP-binding protein.
  
 
 0.671
Your Current Organism:
Allochromatium warmingii
NCBI taxonomy Id: 61595
Other names: A. warmingii, ATCC 14959, Chromatium cuculliferum, Chromatium warmingii, DSM 173, Monas cucullifera, Monas warmingii, strain 6512
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