STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY23378.1Putative transposase. (152 aa)    
Predicted Functional Partners:
SDY03932.1
Putative transposase of IS4/5 family.
     0.779
SDY23785.1
Putative transposase of IS4/5 family.
     0.779
SDX35798.1
Putative transposase of IS4/5 family.
 
     0.762
SDX86970.1
Putative transposase of IS4/5 family.
 
     0.762
SDY31961.1
Putative transposase of IS4/5 family.
 
     0.762
SDY49897.1
Putative transposase of IS4/5 family.
 
     0.762
SDX93170.1
Transposase DDE domain-containing protein.
  
     0.535
SDY23346.1
Fructokinase.
       0.405
Your Current Organism:
Allochromatium warmingii
NCBI taxonomy Id: 61595
Other names: A. warmingii, ATCC 14959, Chromatium cuculliferum, Chromatium warmingii, DSM 173, Monas cucullifera, Monas warmingii, strain 6512
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.