Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDX29854.1 | SDX37998.1 | SAMN05421644_1015 | SAMN05421644_10269 | Acetoin utilization deacetylase AcuC. | Ankyrin repeat-containing protein. | 0.879 |
SDX29854.1 | SDX78224.1 | SAMN05421644_1015 | SAMN05421644_11324 | Acetoin utilization deacetylase AcuC. | PLD-like domain-containing protein. | 0.972 |
SDX29854.1 | SDY12179.1 | SAMN05421644_1015 | SAMN05421644_13120 | Acetoin utilization deacetylase AcuC. | Hypothetical protein. | 0.984 |
SDX29854.1 | SDY27677.1 | SAMN05421644_1015 | SAMN05421644_14422 | Acetoin utilization deacetylase AcuC. | Hypothetical protein. | 0.982 |
SDX29854.1 | atpD | SAMN05421644_1015 | SAMN05421644_10434 | Acetoin utilization deacetylase AcuC. | F-type H+-transporting ATPase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.713 |
SDX29854.1 | rapA | SAMN05421644_1015 | SAMN05421644_15011 | Acetoin utilization deacetylase AcuC. | ATP-dependent helicase HepA; Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair; Belongs to the SNF2/RAD54 helicase family. RapA subfamily. | 0.972 |
SDX37998.1 | SDX29854.1 | SAMN05421644_10269 | SAMN05421644_1015 | Ankyrin repeat-containing protein. | Acetoin utilization deacetylase AcuC. | 0.879 |
SDX37998.1 | SDX78224.1 | SAMN05421644_10269 | SAMN05421644_11324 | Ankyrin repeat-containing protein. | PLD-like domain-containing protein. | 0.822 |
SDX37998.1 | SDY12179.1 | SAMN05421644_10269 | SAMN05421644_13120 | Ankyrin repeat-containing protein. | Hypothetical protein. | 0.990 |
SDX37998.1 | SDY27677.1 | SAMN05421644_10269 | SAMN05421644_14422 | Ankyrin repeat-containing protein. | Hypothetical protein. | 0.963 |
SDX37998.1 | SDY38540.1 | SAMN05421644_10269 | SAMN05421644_15711 | Ankyrin repeat-containing protein. | Hypothetical protein. | 0.436 |
SDX37998.1 | SDY38952.1 | SAMN05421644_10269 | SAMN05421644_1582 | Ankyrin repeat-containing protein. | Curved DNA-binding protein. | 0.436 |
SDX37998.1 | dnaJ | SAMN05421644_10269 | SAMN05421644_11316 | Ankyrin repeat-containing protein. | Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...] | 0.436 |
SDX37998.1 | rapA | SAMN05421644_10269 | SAMN05421644_15011 | Ankyrin repeat-containing protein. | ATP-dependent helicase HepA; Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair; Belongs to the SNF2/RAD54 helicase family. RapA subfamily. | 0.822 |
SDX78224.1 | SDX29854.1 | SAMN05421644_11324 | SAMN05421644_1015 | PLD-like domain-containing protein. | Acetoin utilization deacetylase AcuC. | 0.972 |
SDX78224.1 | SDX37998.1 | SAMN05421644_11324 | SAMN05421644_10269 | PLD-like domain-containing protein. | Ankyrin repeat-containing protein. | 0.822 |
SDX78224.1 | SDY12179.1 | SAMN05421644_11324 | SAMN05421644_13120 | PLD-like domain-containing protein. | Hypothetical protein. | 0.941 |
SDX78224.1 | SDY27648.1 | SAMN05421644_11324 | SAMN05421644_14421 | PLD-like domain-containing protein. | Uncharacterized protein. | 0.672 |
SDX78224.1 | SDY27677.1 | SAMN05421644_11324 | SAMN05421644_14422 | PLD-like domain-containing protein. | Hypothetical protein. | 0.864 |
SDY12179.1 | SDX29854.1 | SAMN05421644_13120 | SAMN05421644_1015 | Hypothetical protein. | Acetoin utilization deacetylase AcuC. | 0.984 |
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