Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDX59846.1 | SDY31394.1 | SAMN05421644_10775 | SAMN05421644_14810 | Initiator Replication protein. | Radical SAM superfamily enzyme, MoaA/NifB/PqqE/SkfB family. | 0.724 |
SDX59846.1 | SDY31423.1 | SAMN05421644_10775 | SAMN05421644_14811 | Initiator Replication protein. | Radical SAM superfamily enzyme, MoaA/NifB/PqqE/SkfB family. | 0.711 |
SDX59846.1 | SDY31451.1 | SAMN05421644_10775 | SAMN05421644_14812 | Initiator Replication protein. | Hypothetical protein. | 0.716 |
SDX59846.1 | SDY31483.1 | SAMN05421644_10775 | SAMN05421644_14813 | Initiator Replication protein. | Glycosyltransferase involved in cell wall bisynthesis. | 0.727 |
SDX59846.1 | SDY34821.1 | SAMN05421644_10775 | SAMN05421644_15210 | Initiator Replication protein. | Glycosyltransferase, GT2 family. | 0.665 |
SDX90886.1 | SDY31394.1 | SAMN05421644_11910 | SAMN05421644_14810 | Heme oxygenase. | Radical SAM superfamily enzyme, MoaA/NifB/PqqE/SkfB family. | 0.623 |
SDX90886.1 | SDY31423.1 | SAMN05421644_11910 | SAMN05421644_14811 | Heme oxygenase. | Radical SAM superfamily enzyme, MoaA/NifB/PqqE/SkfB family. | 0.645 |
SDX90886.1 | SDY31451.1 | SAMN05421644_11910 | SAMN05421644_14812 | Heme oxygenase. | Hypothetical protein. | 0.668 |
SDX90886.1 | SDY31483.1 | SAMN05421644_11910 | SAMN05421644_14813 | Heme oxygenase. | Glycosyltransferase involved in cell wall bisynthesis. | 0.449 |
SDX90886.1 | SDY34821.1 | SAMN05421644_11910 | SAMN05421644_15210 | Heme oxygenase. | Glycosyltransferase, GT2 family. | 0.460 |
SDY13438.1 | SDY31394.1 | SAMN05421644_13224 | SAMN05421644_14810 | Ribonucleoside-triphosphate reductase. | Radical SAM superfamily enzyme, MoaA/NifB/PqqE/SkfB family. | 0.669 |
SDY13438.1 | SDY31423.1 | SAMN05421644_13224 | SAMN05421644_14811 | Ribonucleoside-triphosphate reductase. | Radical SAM superfamily enzyme, MoaA/NifB/PqqE/SkfB family. | 0.669 |
SDY13438.1 | SDY31451.1 | SAMN05421644_13224 | SAMN05421644_14812 | Ribonucleoside-triphosphate reductase. | Hypothetical protein. | 0.669 |
SDY13438.1 | ribB | SAMN05421644_13224 | SAMN05421644_14219 | Ribonucleoside-triphosphate reductase. | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.907 |
SDY31360.1 | SDY31394.1 | SAMN05421644_1489 | SAMN05421644_14810 | dTDP-6-deoxy-L-talose 4-dehydrogenase (NAD+). | Radical SAM superfamily enzyme, MoaA/NifB/PqqE/SkfB family. | 0.739 |
SDY31360.1 | SDY31423.1 | SAMN05421644_1489 | SAMN05421644_14811 | dTDP-6-deoxy-L-talose 4-dehydrogenase (NAD+). | Radical SAM superfamily enzyme, MoaA/NifB/PqqE/SkfB family. | 0.740 |
SDY31360.1 | SDY31451.1 | SAMN05421644_1489 | SAMN05421644_14812 | dTDP-6-deoxy-L-talose 4-dehydrogenase (NAD+). | Hypothetical protein. | 0.768 |
SDY31360.1 | SDY31483.1 | SAMN05421644_1489 | SAMN05421644_14813 | dTDP-6-deoxy-L-talose 4-dehydrogenase (NAD+). | Glycosyltransferase involved in cell wall bisynthesis. | 0.825 |
SDY31360.1 | SDY34821.1 | SAMN05421644_1489 | SAMN05421644_15210 | dTDP-6-deoxy-L-talose 4-dehydrogenase (NAD+). | Glycosyltransferase, GT2 family. | 0.525 |
SDY31394.1 | SDX59846.1 | SAMN05421644_14810 | SAMN05421644_10775 | Radical SAM superfamily enzyme, MoaA/NifB/PqqE/SkfB family. | Initiator Replication protein. | 0.724 |
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