STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBBP6RB binding protein 6, ubiquitin ligase. (1621 aa)    
Predicted Functional Partners:
WDR33
WD repeat domain 33.
   
 
 0.993
CPSF3
Cleavage and polyadenylation specific factor 3.
    
 
 0.992
CPSF1
Cleavage and polyadenylation specific factor 1.
    
 
 0.992
CPSF2
Cleavage and polyadenylation specificity factor subunit 2.
    
 
 0.991
UBE3D
Ubiquitin protein ligase E3D.
    
 0.981
SYMPK
Symplekin.
    
 
 0.978
FIP1L1
Fip1 domain-containing protein.
    
 
 0.976
TRIP12
Thyroid hormone receptor interactor 12.
   
 
  0.944
WDR77
WD repeat domain 77.
   
 
 0.936
CPSF4L
Cleavage and polyadenylation specific factor 4 like.
    
 
 0.935
Your Current Organism:
Rhinopithecus bieti
NCBI taxonomy Id: 61621
Other names: Pygathrix bieti, R. bieti, black snub-nosed monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.