Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BIRC2 | CASP10 | ENSRBIP00000011618 | ENSRBIP00000020065 | Baculoviral IAP repeat containing 2. | Caspase 10; Belongs to the peptidase C14A family. | 0.468 |
BIRC2 | CASP8 | ENSRBIP00000011618 | ENSRBIP00000042695 | Baculoviral IAP repeat containing 2. | Caspase 8; Belongs to the peptidase C14A family. | 0.791 |
BIRC2 | FADD | ENSRBIP00000011618 | ENSRBIP00000026089 | Baculoviral IAP repeat containing 2. | FAS-associated death domain protein; Apoptotic adaptor molecule that recruits caspase-8 or caspase-10 to the activated Fas (CD95) or TNFR-1 receptors. The resulting aggregate called the death-inducing signaling complex (DISC) performs caspase-8 proteolytic activation. Active caspase-8 initiates the subsequent cascade of caspases mediating apoptosis. Involved in interferon-mediated antiviral immune response, playing a role in the positive regulation of interferon signaling. | 0.964 |
BIRC2 | RIPK1 | ENSRBIP00000011618 | ENSRBIP00000041343 | Baculoviral IAP repeat containing 2. | Receptor interacting serine/threonine kinase 1. | 0.995 |
BIRC2 | RIPK3 | ENSRBIP00000011618 | ENSRBIP00000002451 | Baculoviral IAP repeat containing 2. | Receptor interacting serine/threonine kinase 3. | 0.948 |
BIRC2 | TNF | ENSRBIP00000011618 | ENSRBIP00000011080 | Baculoviral IAP repeat containing 2. | Tumor necrosis factor; Belongs to the tumor necrosis factor family. | 0.973 |
BIRC2 | TNFAIP3 | ENSRBIP00000011618 | ENSRBIP00000020094 | Baculoviral IAP repeat containing 2. | TNF alpha induced protein 3. | 0.700 |
BIRC2 | TRADD | ENSRBIP00000011618 | ENSRBIP00000019058 | Baculoviral IAP repeat containing 2. | TNFRSF1A associated via death domain. | 0.997 |
CASP10 | BIRC2 | ENSRBIP00000020065 | ENSRBIP00000011618 | Caspase 10; Belongs to the peptidase C14A family. | Baculoviral IAP repeat containing 2. | 0.468 |
CASP10 | CASP8 | ENSRBIP00000020065 | ENSRBIP00000042695 | Caspase 10; Belongs to the peptidase C14A family. | Caspase 8; Belongs to the peptidase C14A family. | 0.994 |
CASP10 | FADD | ENSRBIP00000020065 | ENSRBIP00000026089 | Caspase 10; Belongs to the peptidase C14A family. | FAS-associated death domain protein; Apoptotic adaptor molecule that recruits caspase-8 or caspase-10 to the activated Fas (CD95) or TNFR-1 receptors. The resulting aggregate called the death-inducing signaling complex (DISC) performs caspase-8 proteolytic activation. Active caspase-8 initiates the subsequent cascade of caspases mediating apoptosis. Involved in interferon-mediated antiviral immune response, playing a role in the positive regulation of interferon signaling. | 0.997 |
CASP10 | MLKL | ENSRBIP00000020065 | ENSRBIP00000004197 | Caspase 10; Belongs to the peptidase C14A family. | Mixed lineage kinase domain like pseudokinase. | 0.535 |
CASP10 | RIPK1 | ENSRBIP00000020065 | ENSRBIP00000041343 | Caspase 10; Belongs to the peptidase C14A family. | Receptor interacting serine/threonine kinase 1. | 0.971 |
CASP10 | RIPK3 | ENSRBIP00000020065 | ENSRBIP00000002451 | Caspase 10; Belongs to the peptidase C14A family. | Receptor interacting serine/threonine kinase 3. | 0.955 |
CASP10 | TNF | ENSRBIP00000020065 | ENSRBIP00000011080 | Caspase 10; Belongs to the peptidase C14A family. | Tumor necrosis factor; Belongs to the tumor necrosis factor family. | 0.872 |
CASP10 | TRADD | ENSRBIP00000020065 | ENSRBIP00000019058 | Caspase 10; Belongs to the peptidase C14A family. | TNFRSF1A associated via death domain. | 0.986 |
CASP8 | BIRC2 | ENSRBIP00000042695 | ENSRBIP00000011618 | Caspase 8; Belongs to the peptidase C14A family. | Baculoviral IAP repeat containing 2. | 0.791 |
CASP8 | CASP10 | ENSRBIP00000042695 | ENSRBIP00000020065 | Caspase 8; Belongs to the peptidase C14A family. | Caspase 10; Belongs to the peptidase C14A family. | 0.994 |
CASP8 | FADD | ENSRBIP00000042695 | ENSRBIP00000026089 | Caspase 8; Belongs to the peptidase C14A family. | FAS-associated death domain protein; Apoptotic adaptor molecule that recruits caspase-8 or caspase-10 to the activated Fas (CD95) or TNFR-1 receptors. The resulting aggregate called the death-inducing signaling complex (DISC) performs caspase-8 proteolytic activation. Active caspase-8 initiates the subsequent cascade of caspases mediating apoptosis. Involved in interferon-mediated antiviral immune response, playing a role in the positive regulation of interferon signaling. | 0.999 |
CASP8 | MLKL | ENSRBIP00000042695 | ENSRBIP00000004197 | Caspase 8; Belongs to the peptidase C14A family. | Mixed lineage kinase domain like pseudokinase. | 0.632 |
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