Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARHGEF7 | CDC42 | ENSRBIP00000024273 | ENSRBIP00000037478 | Rho guanine nucleotide exchange factor 7. | Uncharacterized protein. | 0.964 |
ARHGEF7 | GNG12 | ENSRBIP00000024273 | ENSRBIP00000030798 | Rho guanine nucleotide exchange factor 7. | Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. | 0.406 |
ARHGEF7 | ITSN2 | ENSRBIP00000024273 | ENSRBIP00000019482 | Rho guanine nucleotide exchange factor 7. | Intersectin 2. | 0.954 |
ARHGEF7 | NCK1 | ENSRBIP00000024273 | ENSRBIP00000013204 | Rho guanine nucleotide exchange factor 7. | NCK adaptor protein 1. | 0.644 |
ARHGEF7 | NCK2 | ENSRBIP00000024273 | ENSRBIP00000034686 | Rho guanine nucleotide exchange factor 7. | Cytoplasmic protein. | 0.735 |
ARHGEF7 | PAK4 | ENSRBIP00000024273 | ENSRBIP00000004430 | Rho guanine nucleotide exchange factor 7. | Non-specific serine/threonine protein kinase. | 0.962 |
ARHGEF7 | RAC2 | ENSRBIP00000024273 | ENSRBIP00000040103 | Rho guanine nucleotide exchange factor 7. | Rac family small GTPase 2. | 0.955 |
CDC42 | ARHGEF7 | ENSRBIP00000037478 | ENSRBIP00000024273 | Uncharacterized protein. | Rho guanine nucleotide exchange factor 7. | 0.964 |
CDC42 | ITSN2 | ENSRBIP00000037478 | ENSRBIP00000019482 | Uncharacterized protein. | Intersectin 2. | 0.994 |
CDC42 | LIMK1 | ENSRBIP00000037478 | ENSRBIP00000010107 | Uncharacterized protein. | LIM domain kinase 1. | 0.458 |
CDC42 | LIMK2 | ENSRBIP00000037478 | ENSRBIP00000024891 | Uncharacterized protein. | LIM domain kinase 2. | 0.416 |
CDC42 | NCK1 | ENSRBIP00000037478 | ENSRBIP00000013204 | Uncharacterized protein. | NCK adaptor protein 1. | 0.504 |
CDC42 | NCK2 | ENSRBIP00000037478 | ENSRBIP00000034686 | Uncharacterized protein. | Cytoplasmic protein. | 0.418 |
CDC42 | PAK4 | ENSRBIP00000037478 | ENSRBIP00000004430 | Uncharacterized protein. | Non-specific serine/threonine protein kinase. | 0.968 |
CDC42 | RAC2 | ENSRBIP00000037478 | ENSRBIP00000040103 | Uncharacterized protein. | Rac family small GTPase 2. | 0.939 |
GNG12 | ARHGEF7 | ENSRBIP00000030798 | ENSRBIP00000024273 | Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. | Rho guanine nucleotide exchange factor 7. | 0.406 |
GNG12 | PAK4 | ENSRBIP00000030798 | ENSRBIP00000004430 | Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. | Non-specific serine/threonine protein kinase. | 0.926 |
GNG12 | RAC2 | ENSRBIP00000030798 | ENSRBIP00000040103 | Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. | Rac family small GTPase 2. | 0.919 |
ITSN2 | ARHGEF7 | ENSRBIP00000019482 | ENSRBIP00000024273 | Intersectin 2. | Rho guanine nucleotide exchange factor 7. | 0.954 |
ITSN2 | CDC42 | ENSRBIP00000019482 | ENSRBIP00000037478 | Intersectin 2. | Uncharacterized protein. | 0.994 |
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