Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CERCAM | COL17A1 | ENSRBIP00000010202 | ENSRBIP00000003881 | Cerebral endothelial cell adhesion molecule. | Collagen type XVII alpha 1 chain. | 0.424 |
CERCAM | COL6A2 | ENSRBIP00000010202 | ENSRBIP00000029281 | Cerebral endothelial cell adhesion molecule. | Collagen type VI alpha 2 chain. | 0.459 |
CERCAM | LHPP | ENSRBIP00000010202 | ENSRBIP00000010555 | Cerebral endothelial cell adhesion molecule. | Phospholysine phosphohistidine inorganic pyrophosphate phosphatase. | 0.562 |
CERCAM | NF2 | ENSRBIP00000010202 | ENSRBIP00000024359 | Cerebral endothelial cell adhesion molecule. | Neurofibromin 2. | 0.442 |
CERCAM | OGFOD2 | ENSRBIP00000010202 | ENSRBIP00000023734 | Cerebral endothelial cell adhesion molecule. | 2-oxoglutarate and iron dependent oxygenase domain containing 2. | 0.408 |
CERCAM | PLOD1 | ENSRBIP00000010202 | ENSRBIP00000024038 | Cerebral endothelial cell adhesion molecule. | Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1. | 0.554 |
CERCAM | PLOD2 | ENSRBIP00000010202 | ENSRBIP00000038967 | Cerebral endothelial cell adhesion molecule. | Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2. | 0.521 |
CERCAM | PLOD3 | ENSRBIP00000010202 | ENSRBIP00000025732 | Cerebral endothelial cell adhesion molecule. | Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3. | 0.556 |
COL17A1 | CERCAM | ENSRBIP00000003881 | ENSRBIP00000010202 | Collagen type XVII alpha 1 chain. | Cerebral endothelial cell adhesion molecule. | 0.424 |
COL17A1 | COL6A2 | ENSRBIP00000003881 | ENSRBIP00000029281 | Collagen type XVII alpha 1 chain. | Collagen type VI alpha 2 chain. | 0.537 |
COL17A1 | PLOD1 | ENSRBIP00000003881 | ENSRBIP00000024038 | Collagen type XVII alpha 1 chain. | Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1. | 0.593 |
COL17A1 | PLOD2 | ENSRBIP00000003881 | ENSRBIP00000038967 | Collagen type XVII alpha 1 chain. | Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2. | 0.503 |
COL17A1 | PLOD3 | ENSRBIP00000003881 | ENSRBIP00000025732 | Collagen type XVII alpha 1 chain. | Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3. | 0.519 |
COL6A2 | CERCAM | ENSRBIP00000029281 | ENSRBIP00000010202 | Collagen type VI alpha 2 chain. | Cerebral endothelial cell adhesion molecule. | 0.459 |
COL6A2 | COL17A1 | ENSRBIP00000029281 | ENSRBIP00000003881 | Collagen type VI alpha 2 chain. | Collagen type XVII alpha 1 chain. | 0.537 |
COL6A2 | PLOD1 | ENSRBIP00000029281 | ENSRBIP00000024038 | Collagen type VI alpha 2 chain. | Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1. | 0.587 |
COL6A2 | PLOD2 | ENSRBIP00000029281 | ENSRBIP00000038967 | Collagen type VI alpha 2 chain. | Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2. | 0.466 |
COL6A2 | PLOD3 | ENSRBIP00000029281 | ENSRBIP00000025732 | Collagen type VI alpha 2 chain. | Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3. | 0.466 |
LHPP | CERCAM | ENSRBIP00000010555 | ENSRBIP00000010202 | Phospholysine phosphohistidine inorganic pyrophosphate phosphatase. | Cerebral endothelial cell adhesion molecule. | 0.562 |
LHPP | NF2 | ENSRBIP00000010555 | ENSRBIP00000024359 | Phospholysine phosphohistidine inorganic pyrophosphate phosphatase. | Neurofibromin 2. | 0.442 |
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