Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CD44 | RUNX2 | ENSRBIP00000022264 | ENSRBIP00000007542 | CD44 molecule (Indian blood group). | RUNX family transcription factor 2. | 0.454 |
CD44 | TP53 | ENSRBIP00000022264 | ENSRBIP00000028632 | CD44 molecule (Indian blood group). | Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. | 0.496 |
CD44 | TWIST2 | ENSRBIP00000022264 | ENSRBIP00000012937 | CD44 molecule (Indian blood group). | Twist family bHLH transcription factor 2. | 0.915 |
CD44 | ZEB1 | ENSRBIP00000022264 | ENSRBIP00000015749 | CD44 molecule (Indian blood group). | Zinc finger E-box binding homeobox 1. | 0.471 |
EVX1 | TWIST2 | ENSRBIP00000020842 | ENSRBIP00000012937 | Even-skipped homeobox 1. | Twist family bHLH transcription factor 2. | 0.441 |
FOXN4 | TWIST2 | ENSRBIP00000001146 | ENSRBIP00000012937 | Forkhead box N4. | Twist family bHLH transcription factor 2. | 0.460 |
RUNX2 | CD44 | ENSRBIP00000007542 | ENSRBIP00000022264 | RUNX family transcription factor 2. | CD44 molecule (Indian blood group). | 0.454 |
RUNX2 | TCF12 | ENSRBIP00000007542 | ENSRBIP00000008964 | RUNX family transcription factor 2. | Transcription factor 12. | 0.484 |
RUNX2 | TCF3 | ENSRBIP00000007542 | ENSRBIP00000012099 | RUNX family transcription factor 2. | Transcription factor 3. | 0.549 |
RUNX2 | TCF4 | ENSRBIP00000007542 | ENSRBIP00000038550 | RUNX family transcription factor 2. | Transcription factor 4. | 0.488 |
RUNX2 | TP53 | ENSRBIP00000007542 | ENSRBIP00000028632 | RUNX family transcription factor 2. | Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. | 0.636 |
RUNX2 | TWIST2 | ENSRBIP00000007542 | ENSRBIP00000012937 | RUNX family transcription factor 2. | Twist family bHLH transcription factor 2. | 0.461 |
SNAI2 | TP53 | ENSRBIP00000034934 | ENSRBIP00000028632 | Snail family transcriptional repressor 2. | Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. | 0.542 |
SNAI2 | TWIST2 | ENSRBIP00000034934 | ENSRBIP00000012937 | Snail family transcriptional repressor 2. | Twist family bHLH transcription factor 2. | 0.441 |
TCF12 | RUNX2 | ENSRBIP00000008964 | ENSRBIP00000007542 | Transcription factor 12. | RUNX family transcription factor 2. | 0.484 |
TCF12 | TCF3 | ENSRBIP00000008964 | ENSRBIP00000012099 | Transcription factor 12. | Transcription factor 3. | 0.542 |
TCF12 | TCF4 | ENSRBIP00000008964 | ENSRBIP00000038550 | Transcription factor 12. | Transcription factor 4. | 0.914 |
TCF12 | TWIST2 | ENSRBIP00000008964 | ENSRBIP00000012937 | Transcription factor 12. | Twist family bHLH transcription factor 2. | 0.590 |
TCF3 | RUNX2 | ENSRBIP00000012099 | ENSRBIP00000007542 | Transcription factor 3. | RUNX family transcription factor 2. | 0.549 |
TCF3 | TCF12 | ENSRBIP00000012099 | ENSRBIP00000008964 | Transcription factor 3. | Transcription factor 12. | 0.542 |
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