Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDK5RAP3 | DDRGK1 | ENSRBIP00000031189 | ENSRBIP00000027563 | CDK5 regulatory subunit associated protein 3. | DDRGK domain containing 1. | 0.959 |
CDK5RAP3 | ENSRBIP00000037987 | ENSRBIP00000031189 | ENSRBIP00000037987 | CDK5 regulatory subunit associated protein 3. | Ubiquitin-fold modifier-conjugating enzyme 1; E2-like enzyme which forms an intermediate with UFM1 via a thioester linkage. | 0.463 |
CDK5RAP3 | UBA5 | ENSRBIP00000031189 | ENSRBIP00000003856 | CDK5 regulatory subunit associated protein 3. | Ubiquitin like modifier activating enzyme 5. | 0.569 |
CDK5RAP3 | UFC1 | ENSRBIP00000031189 | ENSRBIP00000037194 | CDK5 regulatory subunit associated protein 3. | Ubiquitin-fold modifier-conjugating enzyme 1; E2-like enzyme which forms an intermediate with UFM1 via a thioester linkage. | 0.463 |
CDK5RAP3 | UFL1 | ENSRBIP00000031189 | ENSRBIP00000039421 | CDK5 regulatory subunit associated protein 3. | UFM1 specific ligase 1. | 0.945 |
CDK5RAP3 | UFSP2 | ENSRBIP00000031189 | ENSRBIP00000014325 | CDK5 regulatory subunit associated protein 3. | UFM1 specific peptidase 2. | 0.601 |
DDRGK1 | CDK5RAP3 | ENSRBIP00000027563 | ENSRBIP00000031189 | DDRGK domain containing 1. | CDK5 regulatory subunit associated protein 3. | 0.959 |
DDRGK1 | ENSRBIP00000003737 | ENSRBIP00000027563 | ENSRBIP00000003737 | DDRGK domain containing 1. | Uncharacterized protein. | 0.497 |
DDRGK1 | ENSRBIP00000037987 | ENSRBIP00000027563 | ENSRBIP00000037987 | DDRGK domain containing 1. | Ubiquitin-fold modifier-conjugating enzyme 1; E2-like enzyme which forms an intermediate with UFM1 via a thioester linkage. | 0.656 |
DDRGK1 | UBA5 | ENSRBIP00000027563 | ENSRBIP00000003856 | DDRGK domain containing 1. | Ubiquitin like modifier activating enzyme 5. | 0.596 |
DDRGK1 | UFC1 | ENSRBIP00000027563 | ENSRBIP00000037194 | DDRGK domain containing 1. | Ubiquitin-fold modifier-conjugating enzyme 1; E2-like enzyme which forms an intermediate with UFM1 via a thioester linkage. | 0.656 |
DDRGK1 | UFL1 | ENSRBIP00000027563 | ENSRBIP00000039421 | DDRGK domain containing 1. | UFM1 specific ligase 1. | 0.939 |
DDRGK1 | UFM1 | ENSRBIP00000027563 | ENSRBIP00000021924 | DDRGK domain containing 1. | Ubiquitin fold modifier 1. | 0.497 |
DDRGK1 | UFM1-2 | ENSRBIP00000027563 | ENSRBIP00000002459 | DDRGK domain containing 1. | Ubiquitin-fold modifier 1; Ubiquitin-like modifier which can be covalently attached to substrate proteins as a monomer or a lysine-linked polymer in a post- translational process called ufmylation. Ufmylation on lysine residues of proteins may play a crucial role in a number of cellular processes. | 0.497 |
DDRGK1 | UFSP2 | ENSRBIP00000027563 | ENSRBIP00000014325 | DDRGK domain containing 1. | UFM1 specific peptidase 2. | 0.659 |
ENSRBIP00000003737 | DDRGK1 | ENSRBIP00000003737 | ENSRBIP00000027563 | Uncharacterized protein. | DDRGK domain containing 1. | 0.497 |
ENSRBIP00000003737 | ENSRBIP00000037987 | ENSRBIP00000003737 | ENSRBIP00000037987 | Uncharacterized protein. | Ubiquitin-fold modifier-conjugating enzyme 1; E2-like enzyme which forms an intermediate with UFM1 via a thioester linkage. | 0.670 |
ENSRBIP00000003737 | UBA5 | ENSRBIP00000003737 | ENSRBIP00000003856 | Uncharacterized protein. | Ubiquitin like modifier activating enzyme 5. | 0.872 |
ENSRBIP00000003737 | UFC1 | ENSRBIP00000003737 | ENSRBIP00000037194 | Uncharacterized protein. | Ubiquitin-fold modifier-conjugating enzyme 1; E2-like enzyme which forms an intermediate with UFM1 via a thioester linkage. | 0.670 |
ENSRBIP00000003737 | UFL1 | ENSRBIP00000003737 | ENSRBIP00000039421 | Uncharacterized protein. | UFM1 specific ligase 1. | 0.540 |
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