Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ATXN7 | KCNN3 | ENSRBIP00000000454 | ENSRBIP00000025582 | SCA7 domain-containing protein. | Potassium calcium-activated channel subfamily N member 3. | 0.848 |
ATXN7 | KMT2D | ENSRBIP00000000454 | ENSRBIP00000010078 | SCA7 domain-containing protein. | Lysine methyltransferase 2D. | 0.726 |
ATXN7 | MED12 | ENSRBIP00000000454 | ENSRBIP00000031058 | SCA7 domain-containing protein. | Mediator complex subunit 12. | 0.705 |
ATXN7 | PAXIP1 | ENSRBIP00000000454 | ENSRBIP00000042085 | SCA7 domain-containing protein. | PAX interacting protein 1. | 0.699 |
ATXN7 | RUNX1 | ENSRBIP00000000454 | ENSRBIP00000001162 | SCA7 domain-containing protein. | RUNX family transcription factor 1. | 0.529 |
ATXN7 | RUNX2 | ENSRBIP00000000454 | ENSRBIP00000007542 | SCA7 domain-containing protein. | RUNX family transcription factor 2. | 0.803 |
ATXN7 | RUNX3 | ENSRBIP00000000454 | ENSRBIP00000035040 | SCA7 domain-containing protein. | Runt-related transcription factor; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX. | 0.412 |
ATXN7 | TBP | ENSRBIP00000000454 | ENSRBIP00000004625 | SCA7 domain-containing protein. | TATA-box binding protein. | 0.694 |
ATXN7 | ZFHX3 | ENSRBIP00000000454 | ENSRBIP00000014952 | SCA7 domain-containing protein. | Zinc finger homeobox 3. | 0.699 |
KCNN3 | ATXN7 | ENSRBIP00000025582 | ENSRBIP00000000454 | Potassium calcium-activated channel subfamily N member 3. | SCA7 domain-containing protein. | 0.848 |
KCNN3 | KMT2D | ENSRBIP00000025582 | ENSRBIP00000010078 | Potassium calcium-activated channel subfamily N member 3. | Lysine methyltransferase 2D. | 0.721 |
KCNN3 | MED12 | ENSRBIP00000025582 | ENSRBIP00000031058 | Potassium calcium-activated channel subfamily N member 3. | Mediator complex subunit 12. | 0.848 |
KCNN3 | PAXIP1 | ENSRBIP00000025582 | ENSRBIP00000042085 | Potassium calcium-activated channel subfamily N member 3. | PAX interacting protein 1. | 0.699 |
KCNN3 | RUNX1 | ENSRBIP00000025582 | ENSRBIP00000001162 | Potassium calcium-activated channel subfamily N member 3. | RUNX family transcription factor 1. | 0.555 |
KCNN3 | RUNX2 | ENSRBIP00000025582 | ENSRBIP00000007542 | Potassium calcium-activated channel subfamily N member 3. | RUNX family transcription factor 2. | 0.820 |
KCNN3 | RUNX3 | ENSRBIP00000025582 | ENSRBIP00000035040 | Potassium calcium-activated channel subfamily N member 3. | Runt-related transcription factor; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX. | 0.412 |
KCNN3 | TBP | ENSRBIP00000025582 | ENSRBIP00000004625 | Potassium calcium-activated channel subfamily N member 3. | TATA-box binding protein. | 0.693 |
KCNN3 | ZFHX3 | ENSRBIP00000025582 | ENSRBIP00000014952 | Potassium calcium-activated channel subfamily N member 3. | Zinc finger homeobox 3. | 0.836 |
KMT2D | ATXN7 | ENSRBIP00000010078 | ENSRBIP00000000454 | Lysine methyltransferase 2D. | SCA7 domain-containing protein. | 0.726 |
KMT2D | KCNN3 | ENSRBIP00000010078 | ENSRBIP00000025582 | Lysine methyltransferase 2D. | Potassium calcium-activated channel subfamily N member 3. | 0.721 |
page 1 of 5