Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ELAVL3 | EWSR1 | ENSRBIP00000021621 | ENSRBIP00000018025 | ELAV-like protein; Belongs to the RRM elav family. | EWS RNA binding protein 1. | 0.467 |
ELAVL3 | FAM98A | ENSRBIP00000021621 | ENSRBIP00000042578 | ELAV-like protein; Belongs to the RRM elav family. | Family with sequence similarity 98 member A. | 0.463 |
ELAVL3 | LOC108521240 | ENSRBIP00000021621 | ENSRBIP00000001570 | ELAV-like protein; Belongs to the RRM elav family. | RRM domain-containing protein. | 0.517 |
ELAVL3 | LOC108529602 | ENSRBIP00000021621 | ENSRBIP00000003750 | ELAV-like protein; Belongs to the RRM elav family. | SHSP domain-containing protein; May contribute to the transparency and refractive index of the lens. Has chaperone-like activity, preventing aggregation of various proteins under a wide range of stress conditions. | 0.447 |
ELAVL3 | RBFOX1 | ENSRBIP00000021621 | ENSRBIP00000042417 | ELAV-like protein; Belongs to the RRM elav family. | RNA binding protein fox-1 homolog 1; RNA-binding protein that regulates alternative splicing events. | 0.489 |
ELAVL3 | RBFOX2 | ENSRBIP00000021621 | ENSRBIP00000019413 | ELAV-like protein; Belongs to the RRM elav family. | RNA binding protein fox-1 homolog 2; RNA-binding protein that regulates alternative splicing events. | 0.484 |
ELAVL3 | RBFOX3 | ENSRBIP00000021621 | ENSRBIP00000033399 | ELAV-like protein; Belongs to the RRM elav family. | RNA binding protein fox-1 homolog 3; RNA-binding protein that regulates alternative splicing events. | 0.587 |
ELAVL3 | RBM24 | ENSRBIP00000021621 | ENSRBIP00000042329 | ELAV-like protein; Belongs to the RRM elav family. | RNA binding motif protein 24. | 0.561 |
ELAVL3 | TRA2A | ENSRBIP00000021621 | ENSRBIP00000025836 | ELAV-like protein; Belongs to the RRM elav family. | Transformer 2 alpha homolog. | 0.608 |
ELAVL3 | XPO1 | ENSRBIP00000021621 | ENSRBIP00000010737 | ELAV-like protein; Belongs to the RRM elav family. | Exportin 1. | 0.466 |
EWSR1 | ELAVL3 | ENSRBIP00000018025 | ENSRBIP00000021621 | EWS RNA binding protein 1. | ELAV-like protein; Belongs to the RRM elav family. | 0.467 |
EWSR1 | FAM98A | ENSRBIP00000018025 | ENSRBIP00000042578 | EWS RNA binding protein 1. | Family with sequence similarity 98 member A. | 0.474 |
EWSR1 | TRA2A | ENSRBIP00000018025 | ENSRBIP00000025836 | EWS RNA binding protein 1. | Transformer 2 alpha homolog. | 0.513 |
EWSR1 | XPO1 | ENSRBIP00000018025 | ENSRBIP00000010737 | EWS RNA binding protein 1. | Exportin 1. | 0.715 |
FAM98A | ELAVL3 | ENSRBIP00000042578 | ENSRBIP00000021621 | Family with sequence similarity 98 member A. | ELAV-like protein; Belongs to the RRM elav family. | 0.463 |
FAM98A | EWSR1 | ENSRBIP00000042578 | ENSRBIP00000018025 | Family with sequence similarity 98 member A. | EWS RNA binding protein 1. | 0.474 |
LOC108521240 | ELAVL3 | ENSRBIP00000001570 | ENSRBIP00000021621 | RRM domain-containing protein. | ELAV-like protein; Belongs to the RRM elav family. | 0.517 |
LOC108521240 | RBFOX2 | ENSRBIP00000001570 | ENSRBIP00000019413 | RRM domain-containing protein. | RNA binding protein fox-1 homolog 2; RNA-binding protein that regulates alternative splicing events. | 0.422 |
LOC108521240 | TRA2A | ENSRBIP00000001570 | ENSRBIP00000025836 | RRM domain-containing protein. | Transformer 2 alpha homolog. | 0.438 |
LOC108529602 | ELAVL3 | ENSRBIP00000003750 | ENSRBIP00000021621 | SHSP domain-containing protein; May contribute to the transparency and refractive index of the lens. Has chaperone-like activity, preventing aggregation of various proteins under a wide range of stress conditions. | ELAV-like protein; Belongs to the RRM elav family. | 0.447 |
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