Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EIF3A | ENSRBIP00000027327 | ENSRBIP00000039328 | ENSRBIP00000027327 | Eukaryotic translation initiation factor 3 subunit A; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF-2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre- initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termi [...] | Uncharacterized protein. | 0.798 |
EIF3A | FBL | ENSRBIP00000039328 | ENSRBIP00000010467 | Eukaryotic translation initiation factor 3 subunit A; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF-2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre- initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termi [...] | Fibrillarin. | 0.481 |
EIF3A | NOP58 | ENSRBIP00000039328 | ENSRBIP00000041105 | Eukaryotic translation initiation factor 3 subunit A; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF-2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre- initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termi [...] | NOP58 ribonucleoprotein. | 0.683 |
ENSRBIP00000005272 | ENSRBIP00000027327 | ENSRBIP00000005272 | ENSRBIP00000027327 | Uncharacterized protein. | Uncharacterized protein. | 0.649 |
ENSRBIP00000005272 | NOP58 | ENSRBIP00000005272 | ENSRBIP00000041105 | Uncharacterized protein. | NOP58 ribonucleoprotein. | 0.488 |
ENSRBIP00000007206 | ENSRBIP00000027327 | ENSRBIP00000007206 | ENSRBIP00000027327 | Nucleoplasmin domain-containing protein. | Uncharacterized protein. | 0.649 |
ENSRBIP00000007206 | NOP58 | ENSRBIP00000007206 | ENSRBIP00000041105 | Nucleoplasmin domain-containing protein. | NOP58 ribonucleoprotein. | 0.488 |
ENSRBIP00000015186 | ENSRBIP00000027327 | ENSRBIP00000015186 | ENSRBIP00000027327 | Uncharacterized protein. | Uncharacterized protein. | 0.649 |
ENSRBIP00000015186 | NOP58 | ENSRBIP00000015186 | ENSRBIP00000041105 | Uncharacterized protein. | NOP58 ribonucleoprotein. | 0.488 |
ENSRBIP00000015568 | ENSRBIP00000027327 | ENSRBIP00000015568 | ENSRBIP00000027327 | Uncharacterized protein. | Uncharacterized protein. | 0.649 |
ENSRBIP00000015568 | NOP58 | ENSRBIP00000015568 | ENSRBIP00000041105 | Uncharacterized protein. | NOP58 ribonucleoprotein. | 0.488 |
ENSRBIP00000027327 | EIF3A | ENSRBIP00000027327 | ENSRBIP00000039328 | Uncharacterized protein. | Eukaryotic translation initiation factor 3 subunit A; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF-2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre- initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termi [...] | 0.798 |
ENSRBIP00000027327 | ENSRBIP00000005272 | ENSRBIP00000027327 | ENSRBIP00000005272 | Uncharacterized protein. | Uncharacterized protein. | 0.649 |
ENSRBIP00000027327 | ENSRBIP00000007206 | ENSRBIP00000027327 | ENSRBIP00000007206 | Uncharacterized protein. | Nucleoplasmin domain-containing protein. | 0.649 |
ENSRBIP00000027327 | ENSRBIP00000015186 | ENSRBIP00000027327 | ENSRBIP00000015186 | Uncharacterized protein. | Uncharacterized protein. | 0.649 |
ENSRBIP00000027327 | ENSRBIP00000015568 | ENSRBIP00000027327 | ENSRBIP00000015568 | Uncharacterized protein. | Uncharacterized protein. | 0.649 |
ENSRBIP00000027327 | FBL | ENSRBIP00000027327 | ENSRBIP00000010467 | Uncharacterized protein. | Fibrillarin. | 0.683 |
ENSRBIP00000027327 | HNRNPU | ENSRBIP00000027327 | ENSRBIP00000015652 | Uncharacterized protein. | Heterogeneous nuclear ribonucleoprotein U. | 0.722 |
ENSRBIP00000027327 | NOP58 | ENSRBIP00000027327 | ENSRBIP00000041105 | Uncharacterized protein. | NOP58 ribonucleoprotein. | 0.706 |
ENSRBIP00000027327 | PAN2 | ENSRBIP00000027327 | ENSRBIP00000011485 | Uncharacterized protein. | PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent [...] | 0.656 |
page 1 of 2