Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACD | ENSRBIP00000025761 | ENSRBIP00000038324 | ENSRBIP00000025761 | ACD shelterin complex subunit and telomerase recruitment factor. | TINF2_N domain-containing protein. | 0.959 |
ACD | ENSRBIP00000034985 | ENSRBIP00000038324 | ENSRBIP00000034985 | ACD shelterin complex subunit and telomerase recruitment factor. | TINF2_N domain-containing protein. | 0.959 |
ACD | POT1 | ENSRBIP00000038324 | ENSRBIP00000033081 | ACD shelterin complex subunit and telomerase recruitment factor. | Protection of telomeres 1. | 0.995 |
ACD | TERF1 | ENSRBIP00000038324 | ENSRBIP00000038727 | ACD shelterin complex subunit and telomerase recruitment factor. | Telomeric repeat-binding factor; Binds the telomeric double-stranded 5'-TTAGGG-3' repeat. | 0.983 |
ACD | TERF2 | ENSRBIP00000038324 | ENSRBIP00000029514 | ACD shelterin complex subunit and telomerase recruitment factor. | Telomeric repeat-binding factor; Binds the telomeric double-stranded 5'-TTAGGG-3' repeat. | 0.986 |
ACD | TERF2IP | ENSRBIP00000038324 | ENSRBIP00000017715 | ACD shelterin complex subunit and telomerase recruitment factor. | TERF2 interacting protein. | 0.980 |
ACD | TINF2 | ENSRBIP00000038324 | ENSRBIP00000037460 | ACD shelterin complex subunit and telomerase recruitment factor. | TINF2_N domain-containing protein. | 0.959 |
DCLRE1B | ENSRBIP00000025761 | ENSRBIP00000017245 | ENSRBIP00000025761 | DNA cross-link repair 1B. | TINF2_N domain-containing protein. | 0.436 |
DCLRE1B | ENSRBIP00000034985 | ENSRBIP00000017245 | ENSRBIP00000034985 | DNA cross-link repair 1B. | TINF2_N domain-containing protein. | 0.436 |
DCLRE1B | NBN | ENSRBIP00000017245 | ENSRBIP00000025957 | DNA cross-link repair 1B. | Nibrin; Component of the MRE11-RAD50-NBN (MRN complex) which plays a critical role in the cellular response to DNA damage and the maintenance of chromosome integrity. The complex is involved in double- strand break (DSB) repair, DNA recombination, maintenance of telomere integrity, cell cycle checkpoint control and meiosis. | 0.607 |
DCLRE1B | POT1 | ENSRBIP00000017245 | ENSRBIP00000033081 | DNA cross-link repair 1B. | Protection of telomeres 1. | 0.534 |
DCLRE1B | SLX4 | ENSRBIP00000017245 | ENSRBIP00000032914 | DNA cross-link repair 1B. | SLX4 structure-specific endonuclease subunit. | 0.721 |
DCLRE1B | TERF1 | ENSRBIP00000017245 | ENSRBIP00000038727 | DNA cross-link repair 1B. | Telomeric repeat-binding factor; Binds the telomeric double-stranded 5'-TTAGGG-3' repeat. | 0.663 |
DCLRE1B | TERF2 | ENSRBIP00000017245 | ENSRBIP00000029514 | DNA cross-link repair 1B. | Telomeric repeat-binding factor; Binds the telomeric double-stranded 5'-TTAGGG-3' repeat. | 0.957 |
DCLRE1B | TERF2IP | ENSRBIP00000017245 | ENSRBIP00000017715 | DNA cross-link repair 1B. | TERF2 interacting protein. | 0.668 |
DCLRE1B | TINF2 | ENSRBIP00000017245 | ENSRBIP00000037460 | DNA cross-link repair 1B. | TINF2_N domain-containing protein. | 0.436 |
ENSRBIP00000025761 | ACD | ENSRBIP00000025761 | ENSRBIP00000038324 | TINF2_N domain-containing protein. | ACD shelterin complex subunit and telomerase recruitment factor. | 0.959 |
ENSRBIP00000025761 | DCLRE1B | ENSRBIP00000025761 | ENSRBIP00000017245 | TINF2_N domain-containing protein. | DNA cross-link repair 1B. | 0.436 |
ENSRBIP00000025761 | POT1 | ENSRBIP00000025761 | ENSRBIP00000033081 | TINF2_N domain-containing protein. | Protection of telomeres 1. | 0.959 |
ENSRBIP00000025761 | TERF1 | ENSRBIP00000025761 | ENSRBIP00000038727 | TINF2_N domain-containing protein. | Telomeric repeat-binding factor; Binds the telomeric double-stranded 5'-TTAGGG-3' repeat. | 0.921 |
page 1 of 5