Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACSF3 | EPRS1 | ENSRBIP00000040192 | ENSRBIP00000021671 | Acyl-CoA synthetase family member 3. | Glutamyl-prolyl-tRNA synthetase. | 0.472 |
ACSF3 | IYD | ENSRBIP00000040192 | ENSRBIP00000002299 | Acyl-CoA synthetase family member 3. | Iodotyrosine deiodinase. | 0.524 |
ACSF3 | MMAB | ENSRBIP00000040192 | ENSRBIP00000039374 | Acyl-CoA synthetase family member 3. | Corrinoid adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family. | 0.591 |
ACSF3 | MMUT | ENSRBIP00000040192 | ENSRBIP00000009374 | Acyl-CoA synthetase family member 3. | Methylmalonyl-CoA mutase. | 0.905 |
EPRS1 | ACSF3 | ENSRBIP00000021671 | ENSRBIP00000040192 | Glutamyl-prolyl-tRNA synthetase. | Acyl-CoA synthetase family member 3. | 0.472 |
EPRS1 | MMAB | ENSRBIP00000021671 | ENSRBIP00000039374 | Glutamyl-prolyl-tRNA synthetase. | Corrinoid adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family. | 0.655 |
EPRS1 | UROS | ENSRBIP00000021671 | ENSRBIP00000012968 | Glutamyl-prolyl-tRNA synthetase. | Uroporphyrinogen III synthase. | 0.544 |
IYD | ACSF3 | ENSRBIP00000002299 | ENSRBIP00000040192 | Iodotyrosine deiodinase. | Acyl-CoA synthetase family member 3. | 0.524 |
IYD | MMAB | ENSRBIP00000002299 | ENSRBIP00000039374 | Iodotyrosine deiodinase. | Corrinoid adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family. | 0.848 |
IYD | UROS | ENSRBIP00000002299 | ENSRBIP00000012968 | Iodotyrosine deiodinase. | Uroporphyrinogen III synthase. | 0.505 |
LMBRD1 | MMAA | ENSRBIP00000028614 | ENSRBIP00000013150 | LMBR1 domain containing 1. | Metabolism of cobalamin associated A. | 0.646 |
LMBRD1 | MMAB | ENSRBIP00000028614 | ENSRBIP00000039374 | LMBR1 domain containing 1. | Corrinoid adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family. | 0.598 |
LMBRD1 | MMACHC | ENSRBIP00000028614 | ENSRBIP00000002047 | LMBR1 domain containing 1. | Metabolism of cobalamin associated C. | 0.640 |
LMBRD1 | MMUT | ENSRBIP00000028614 | ENSRBIP00000009374 | LMBR1 domain containing 1. | Methylmalonyl-CoA mutase. | 0.577 |
LMBRD1 | MTRR | ENSRBIP00000028614 | ENSRBIP00000020688 | LMBR1 domain containing 1. | 5-methyltetrahydrofolate-homocysteine methyltransferase reductase. | 0.585 |
MMAA | LMBRD1 | ENSRBIP00000013150 | ENSRBIP00000028614 | Metabolism of cobalamin associated A. | LMBR1 domain containing 1. | 0.646 |
MMAA | MMAB | ENSRBIP00000013150 | ENSRBIP00000039374 | Metabolism of cobalamin associated A. | Corrinoid adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family. | 0.698 |
MMAA | MMACHC | ENSRBIP00000013150 | ENSRBIP00000002047 | Metabolism of cobalamin associated A. | Metabolism of cobalamin associated C. | 0.665 |
MMAA | MMUT | ENSRBIP00000013150 | ENSRBIP00000009374 | Metabolism of cobalamin associated A. | Methylmalonyl-CoA mutase. | 0.962 |
MMAA | MTRR | ENSRBIP00000013150 | ENSRBIP00000020688 | Metabolism of cobalamin associated A. | 5-methyltetrahydrofolate-homocysteine methyltransferase reductase. | 0.595 |
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