Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LHX5LIM homeobox 5. (376 aa)    
Predicted Functional Partners:
LDB1
LIM domain binding 1.
    
 0.713
CCNK
Cyclin K; Belongs to the cyclin family.
    
   0.709
LDB2
LIM domain binding 2.
    
 0.684
PAX2
Paired box 2.
   
 0.658
PAX8
Paired box 8.
   
 0.639
SSBP4
Single stranded DNA binding protein 4.
    
 
 0.617
SSBP3
Single stranded DNA binding protein 3.
    
 
 0.617
EMX2
Empty spiracles homeobox 2.
    
 0.614
HOXA6
Homeobox A6.
   
 0.600
WNT4
Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.
   
 0.584
Your Current Organism:
Rhinopithecus roxellana
NCBI taxonomy Id: 61622
Other names: Pygathrix roxellana, R. roxellana, golden snub-nosed monkey
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.