Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AAAS | GLE1 | ENSRROP00000033267 | ENSRROP00000023423 | Aladin WD repeat nucleoporin. | GLE1 RNA export mediator. | 0.805 |
AAAS | NUP188 | ENSRROP00000033267 | ENSRROP00000017635 | Aladin WD repeat nucleoporin. | Nucleoporin 188. | 0.983 |
AAAS | NUP214 | ENSRROP00000033267 | ENSRROP00000021749 | Aladin WD repeat nucleoporin. | Nucleoporin 214. | 0.936 |
AAAS | NUP35 | ENSRROP00000033267 | ENSRROP00000006842 | Aladin WD repeat nucleoporin. | Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. | 0.965 |
AAAS | NUP42 | ENSRROP00000033267 | ENSRROP00000010887 | Aladin WD repeat nucleoporin. | Nucleoporin 42. | 0.850 |
AAAS | NUP50 | ENSRROP00000033267 | ENSRROP00000023121 | Aladin WD repeat nucleoporin. | Nucleoporin 50. | 0.933 |
AAAS | NUP88 | ENSRROP00000033267 | ENSRROP00000040712 | Aladin WD repeat nucleoporin. | Nucleoporin 88. | 0.978 |
AAAS | NUP93 | ENSRROP00000033267 | ENSRROP00000044559 | Aladin WD repeat nucleoporin. | Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. | 0.975 |
AAAS | RAE1 | ENSRROP00000033267 | ENSRROP00000042912 | Aladin WD repeat nucleoporin. | Ribonucleic acid export 1. | 0.895 |
AAAS | SEH1L | ENSRROP00000033267 | ENSRROP00000028739 | Aladin WD repeat nucleoporin. | SEH1 like nucleoporin; Belongs to the WD repeat SEC13 family. | 0.969 |
GLE1 | AAAS | ENSRROP00000023423 | ENSRROP00000033267 | GLE1 RNA export mediator. | Aladin WD repeat nucleoporin. | 0.805 |
GLE1 | NUP188 | ENSRROP00000023423 | ENSRROP00000017635 | GLE1 RNA export mediator. | Nucleoporin 188. | 0.707 |
GLE1 | NUP214 | ENSRROP00000023423 | ENSRROP00000021749 | GLE1 RNA export mediator. | Nucleoporin 214. | 0.988 |
GLE1 | NUP35 | ENSRROP00000023423 | ENSRROP00000006842 | GLE1 RNA export mediator. | Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. | 0.802 |
GLE1 | NUP42 | ENSRROP00000023423 | ENSRROP00000010887 | GLE1 RNA export mediator. | Nucleoporin 42. | 0.951 |
GLE1 | NUP50 | ENSRROP00000023423 | ENSRROP00000023121 | GLE1 RNA export mediator. | Nucleoporin 50. | 0.713 |
GLE1 | NUP88 | ENSRROP00000023423 | ENSRROP00000040712 | GLE1 RNA export mediator. | Nucleoporin 88. | 0.867 |
GLE1 | NUP93 | ENSRROP00000023423 | ENSRROP00000044559 | GLE1 RNA export mediator. | Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. | 0.909 |
GLE1 | RAE1 | ENSRROP00000023423 | ENSRROP00000042912 | GLE1 RNA export mediator. | Ribonucleic acid export 1. | 0.978 |
GLE1 | SEH1L | ENSRROP00000023423 | ENSRROP00000028739 | GLE1 RNA export mediator. | SEH1 like nucleoporin; Belongs to the WD repeat SEC13 family. | 0.928 |
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