Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AP4E1 | FAM214A | ENSRROP00000034477 | ENSRROP00000015416 | AP-4 complex subunit epsilon; Component of the adaptor protein complex 4 (AP-4). Adaptor protein complexes are vesicle coat components involved both in vesicle formation and cargo selection. They control the vesicular transport of proteins in different trafficking pathways. AP-4 forms a non clathrin- associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system. | Family with sequence similarity 214 member A. | 0.400 |
AP4E1 | HMG20B | ENSRROP00000034477 | ENSRROP00000003060 | AP-4 complex subunit epsilon; Component of the adaptor protein complex 4 (AP-4). Adaptor protein complexes are vesicle coat components involved both in vesicle formation and cargo selection. They control the vesicular transport of proteins in different trafficking pathways. AP-4 forms a non clathrin- associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system. | High mobility group 20B. | 0.442 |
AP4E1 | LMBRD2 | ENSRROP00000034477 | ENSRROP00000011750 | AP-4 complex subunit epsilon; Component of the adaptor protein complex 4 (AP-4). Adaptor protein complexes are vesicle coat components involved both in vesicle formation and cargo selection. They control the vesicular transport of proteins in different trafficking pathways. AP-4 forms a non clathrin- associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system. | LMBR1 domain containing 2. | 0.594 |
AP4E1 | MEX3C | ENSRROP00000034477 | ENSRROP00000023008 | AP-4 complex subunit epsilon; Component of the adaptor protein complex 4 (AP-4). Adaptor protein complexes are vesicle coat components involved both in vesicle formation and cargo selection. They control the vesicular transport of proteins in different trafficking pathways. AP-4 forms a non clathrin- associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system. | Mex-3 RNA binding family member C. | 0.461 |
AP4E1 | PIGO | ENSRROP00000034477 | ENSRROP00000030146 | AP-4 complex subunit epsilon; Component of the adaptor protein complex 4 (AP-4). Adaptor protein complexes are vesicle coat components involved both in vesicle formation and cargo selection. They control the vesicular transport of proteins in different trafficking pathways. AP-4 forms a non clathrin- associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system. | Phosphatidylinositol glycan anchor biosynthesis class O. | 0.520 |
CAPSL | DEPDC1B | ENSRROP00000013112 | ENSRROP00000018140 | Calcyphosine like. | DEP domain containing 1B. | 0.405 |
CAPSL | LMBRD2 | ENSRROP00000013112 | ENSRROP00000011750 | Calcyphosine like. | LMBR1 domain containing 2. | 0.525 |
DEPDC1B | CAPSL | ENSRROP00000018140 | ENSRROP00000013112 | DEP domain containing 1B. | Calcyphosine like. | 0.405 |
DEPDC1B | LMBRD2 | ENSRROP00000018140 | ENSRROP00000011750 | DEP domain containing 1B. | LMBR1 domain containing 2. | 0.569 |
ESF1 | LMBRD2 | ENSRROP00000015700 | ENSRROP00000011750 | ESF1 nucleolar pre-rRNA processing protein homolog. | LMBR1 domain containing 2. | 0.585 |
FAM214A | AP4E1 | ENSRROP00000015416 | ENSRROP00000034477 | Family with sequence similarity 214 member A. | AP-4 complex subunit epsilon; Component of the adaptor protein complex 4 (AP-4). Adaptor protein complexes are vesicle coat components involved both in vesicle formation and cargo selection. They control the vesicular transport of proteins in different trafficking pathways. AP-4 forms a non clathrin- associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system. | 0.400 |
FAM214A | GNB5 | ENSRROP00000015416 | ENSRROP00000031461 | Family with sequence similarity 214 member A. | G protein subunit beta 5. | 0.417 |
FAM214A | HMG20B | ENSRROP00000015416 | ENSRROP00000003060 | Family with sequence similarity 214 member A. | High mobility group 20B. | 0.463 |
FAM214A | LMBRD2 | ENSRROP00000015416 | ENSRROP00000011750 | Family with sequence similarity 214 member A. | LMBR1 domain containing 2. | 0.566 |
FAM214A | MEX3C | ENSRROP00000015416 | ENSRROP00000023008 | Family with sequence similarity 214 member A. | Mex-3 RNA binding family member C. | 0.565 |
FAM214A | PIGO | ENSRROP00000015416 | ENSRROP00000030146 | Family with sequence similarity 214 member A. | Phosphatidylinositol glycan anchor biosynthesis class O. | 0.471 |
GNB5 | FAM214A | ENSRROP00000031461 | ENSRROP00000015416 | G protein subunit beta 5. | Family with sequence similarity 214 member A. | 0.417 |
GNB5 | LMBRD2 | ENSRROP00000031461 | ENSRROP00000011750 | G protein subunit beta 5. | LMBR1 domain containing 2. | 0.471 |
GNB5 | MEX3C | ENSRROP00000031461 | ENSRROP00000023008 | G protein subunit beta 5. | Mex-3 RNA binding family member C. | 0.430 |
HMG20B | AP4E1 | ENSRROP00000003060 | ENSRROP00000034477 | High mobility group 20B. | AP-4 complex subunit epsilon; Component of the adaptor protein complex 4 (AP-4). Adaptor protein complexes are vesicle coat components involved both in vesicle formation and cargo selection. They control the vesicular transport of proteins in different trafficking pathways. AP-4 forms a non clathrin- associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system. | 0.442 |
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