FMO4 protein (Rhinopithecus roxellana) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

FMO4

Dimethylaniline monooxygenase [N-oxide-forming]. (558 aa)

Predicted Functional Partners:

ENSRROP00000035340

0.940

LOC104670080

0.924

CYP3A4

0.918

CYP4X1

0.456

ABCC2

0.441

CYP2S1

0.428

LOC104670158

0.427

COQ3

0.416

EPHX2

0.411

SLCO5A1

0.408

Your Current Organism:

Rhinopithecus roxellana

NCBI taxonomy Id: 61622
Other names: Pygathrix roxellana, R. roxellana, golden snub-nosed monkey

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABCC2	CYP3A4	ENSRROP00000037112	ENSRROP00000013167	ATP binding cassette subfamily C member 2.	Cytochrome P450 family 3 subfamily A member 4.	0.414
ABCC2	FMO4	ENSRROP00000037112	ENSRROP00000017815	ATP binding cassette subfamily C member 2.	Dimethylaniline monooxygenase [N-oxide-forming].	0.441
COQ3	EPHX2	ENSRROP00000026537	ENSRROP00000007761	Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family.	Epoxide hydrolase 2.	0.823
COQ3	FMO4	ENSRROP00000026537	ENSRROP00000017815	Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family.	Dimethylaniline monooxygenase [N-oxide-forming].	0.416
CYP2S1	CYP3A4	ENSRROP00000025819	ENSRROP00000013167	Cytochrome P450 family 2 subfamily S member 1; Belongs to the cytochrome P450 family.	Cytochrome P450 family 3 subfamily A member 4.	0.936
CYP2S1	FMO4	ENSRROP00000025819	ENSRROP00000017815	Cytochrome P450 family 2 subfamily S member 1; Belongs to the cytochrome P450 family.	Dimethylaniline monooxygenase [N-oxide-forming].	0.428
CYP3A4	ABCC2	ENSRROP00000013167	ENSRROP00000037112	Cytochrome P450 family 3 subfamily A member 4.	ATP binding cassette subfamily C member 2.	0.414
CYP3A4	CYP2S1	ENSRROP00000013167	ENSRROP00000025819	Cytochrome P450 family 3 subfamily A member 4.	Cytochrome P450 family 2 subfamily S member 1; Belongs to the cytochrome P450 family.	0.936
CYP3A4	ENSRROP00000035340	ENSRROP00000013167	ENSRROP00000035340	Cytochrome P450 family 3 subfamily A member 4.	Uncharacterized protein.	0.933
CYP3A4	FMO4	ENSRROP00000013167	ENSRROP00000017815	Cytochrome P450 family 3 subfamily A member 4.	Dimethylaniline monooxygenase [N-oxide-forming].	0.918
CYP3A4	LOC104670080	ENSRROP00000013167	ENSRROP00000003398	Cytochrome P450 family 3 subfamily A member 4.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.945
CYP3A4	LOC104670158	ENSRROP00000013167	ENSRROP00000017676	Cytochrome P450 family 3 subfamily A member 4.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.418
CYP4X1	FMO4	ENSRROP00000039278	ENSRROP00000017815	Cytochrome P450 family 4 subfamily X member 1; Belongs to the cytochrome P450 family.	Dimethylaniline monooxygenase [N-oxide-forming].	0.456
CYP4X1	LOC104670080	ENSRROP00000039278	ENSRROP00000003398	Cytochrome P450 family 4 subfamily X member 1; Belongs to the cytochrome P450 family.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.410
CYP4X1	LOC104670158	ENSRROP00000039278	ENSRROP00000017676	Cytochrome P450 family 4 subfamily X member 1; Belongs to the cytochrome P450 family.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.410
ENSRROP00000035340	CYP3A4	ENSRROP00000035340	ENSRROP00000013167	Uncharacterized protein.	Cytochrome P450 family 3 subfamily A member 4.	0.933
ENSRROP00000035340	EPHX2	ENSRROP00000035340	ENSRROP00000007761	Uncharacterized protein.	Epoxide hydrolase 2.	0.936
ENSRROP00000035340	FMO4	ENSRROP00000035340	ENSRROP00000017815	Uncharacterized protein.	Dimethylaniline monooxygenase [N-oxide-forming].	0.940
EPHX2	COQ3	ENSRROP00000007761	ENSRROP00000026537	Epoxide hydrolase 2.	Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family.	0.823
EPHX2	ENSRROP00000035340	ENSRROP00000007761	ENSRROP00000035340	Epoxide hydrolase 2.	Uncharacterized protein.	0.936