Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSRROP00000027856 | FXN | ENSRROP00000027856 | ENSRROP00000005525 | Uncharacterized protein. | Frataxin. | 0.957 |
ENSRROP00000027856 | ISCU | ENSRROP00000027856 | ENSRROP00000032457 | Uncharacterized protein. | Iron-sulfur cluster assembly enzyme; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins. | 0.956 |
ENSRROP00000027856 | NFU1 | ENSRROP00000027856 | ENSRROP00000038412 | Uncharacterized protein. | NFU1 iron-sulfur cluster scaffold. | 0.564 |
ENSRROP00000027856 | SCLY | ENSRROP00000027856 | ENSRROP00000036175 | Uncharacterized protein. | Selenocysteine lyase. | 0.895 |
FXN | ENSRROP00000027856 | ENSRROP00000005525 | ENSRROP00000027856 | Frataxin. | Uncharacterized protein. | 0.957 |
FXN | ISCU | ENSRROP00000005525 | ENSRROP00000032457 | Frataxin. | Iron-sulfur cluster assembly enzyme; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins. | 0.998 |
FXN | LYRM4 | ENSRROP00000005525 | ENSRROP00000007835 | Frataxin. | Uncharacterized protein; Belongs to the complex I LYR family. | 0.994 |
FXN | MOCOS | ENSRROP00000005525 | ENSRROP00000006439 | Frataxin. | Molybdenum cofactor sulfurase; Sulfurates the molybdenum cofactor. Sulfation of molybdenum is essential for xanthine dehydrogenase (XDH) and aldehyde oxidase (ADO) enzymes in which molybdenum cofactor is liganded by 1 oxygen and 1 sulfur atom in active form. | 0.810 |
FXN | NFU1 | ENSRROP00000005525 | ENSRROP00000038412 | Frataxin. | NFU1 iron-sulfur cluster scaffold. | 0.835 |
FXN | SCLY | ENSRROP00000005525 | ENSRROP00000036175 | Frataxin. | Selenocysteine lyase. | 0.981 |
ISCU | ENSRROP00000027856 | ENSRROP00000032457 | ENSRROP00000027856 | Iron-sulfur cluster assembly enzyme; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins. | Uncharacterized protein. | 0.956 |
ISCU | FXN | ENSRROP00000032457 | ENSRROP00000005525 | Iron-sulfur cluster assembly enzyme; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins. | Frataxin. | 0.998 |
ISCU | LYRM4 | ENSRROP00000032457 | ENSRROP00000007835 | Iron-sulfur cluster assembly enzyme; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins. | Uncharacterized protein; Belongs to the complex I LYR family. | 0.996 |
ISCU | MOCOS | ENSRROP00000032457 | ENSRROP00000006439 | Iron-sulfur cluster assembly enzyme; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins. | Molybdenum cofactor sulfurase; Sulfurates the molybdenum cofactor. Sulfation of molybdenum is essential for xanthine dehydrogenase (XDH) and aldehyde oxidase (ADO) enzymes in which molybdenum cofactor is liganded by 1 oxygen and 1 sulfur atom in active form. | 0.999 |
ISCU | NFU1 | ENSRROP00000032457 | ENSRROP00000038412 | Iron-sulfur cluster assembly enzyme; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins. | NFU1 iron-sulfur cluster scaffold. | 0.903 |
ISCU | SCLY | ENSRROP00000032457 | ENSRROP00000036175 | Iron-sulfur cluster assembly enzyme; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins. | Selenocysteine lyase. | 0.998 |
ISCU | TSTD1 | ENSRROP00000032457 | ENSRROP00000021338 | Iron-sulfur cluster assembly enzyme; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins. | Thiosulfate sulfurtransferase like domain containing 1. | 0.907 |
LYRM4 | FXN | ENSRROP00000007835 | ENSRROP00000005525 | Uncharacterized protein; Belongs to the complex I LYR family. | Frataxin. | 0.994 |
LYRM4 | ISCU | ENSRROP00000007835 | ENSRROP00000032457 | Uncharacterized protein; Belongs to the complex I LYR family. | Iron-sulfur cluster assembly enzyme; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins. | 0.996 |
LYRM4 | NFU1 | ENSRROP00000007835 | ENSRROP00000038412 | Uncharacterized protein; Belongs to the complex I LYR family. | NFU1 iron-sulfur cluster scaffold. | 0.564 |
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