Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CASC3 | DCP1A | ENSRROP00000005421 | ENSRROP00000039598 | CASC3 exon junction complex subunit. | Decapping mRNA 1A. | 0.589 |
CASC3 | ENSRROP00000039052 | ENSRROP00000005421 | ENSRROP00000039052 | CASC3 exon junction complex subunit. | AAA_12 domain-containing protein. | 0.810 |
CASC3 | SMG5 | ENSRROP00000005421 | ENSRROP00000011385 | CASC3 exon junction complex subunit. | SMG5 nonsense mediated mRNA decay factor. | 0.603 |
CASC3 | SMG6 | ENSRROP00000005421 | ENSRROP00000012238 | CASC3 exon junction complex subunit. | SMG6 nonsense mediated mRNA decay factor. | 0.808 |
CASC3 | SMG7 | ENSRROP00000005421 | ENSRROP00000023868 | CASC3 exon junction complex subunit. | SMG7 nonsense mediated mRNA decay factor. | 0.568 |
CASC3 | UPF2 | ENSRROP00000005421 | ENSRROP00000040630 | CASC3 exon junction complex subunit. | UPF2 regulator of nonsense mediated mRNA decay. | 0.939 |
CASC3 | UPF3A | ENSRROP00000005421 | ENSRROP00000003061 | CASC3 exon junction complex subunit. | UPF3A regulator of nonsense mediated mRNA decay. | 0.988 |
CASC3 | UPF3B | ENSRROP00000005421 | ENSRROP00000035009 | CASC3 exon junction complex subunit. | UPF3B regulator of nonsense mediated mRNA decay. | 0.988 |
CASC3 | ZGRF1 | ENSRROP00000005421 | ENSRROP00000007813 | CASC3 exon junction complex subunit. | DUF2439 domain-containing protein. | 0.810 |
DCP1A | CASC3 | ENSRROP00000039598 | ENSRROP00000005421 | Decapping mRNA 1A. | CASC3 exon junction complex subunit. | 0.589 |
DCP1A | ENSRROP00000039052 | ENSRROP00000039598 | ENSRROP00000039052 | Decapping mRNA 1A. | AAA_12 domain-containing protein. | 0.757 |
DCP1A | GSPT1 | ENSRROP00000039598 | ENSRROP00000014290 | Decapping mRNA 1A. | G1 to S phase transition 1. | 0.453 |
DCP1A | SMG5 | ENSRROP00000039598 | ENSRROP00000011385 | Decapping mRNA 1A. | SMG5 nonsense mediated mRNA decay factor. | 0.749 |
DCP1A | SMG6 | ENSRROP00000039598 | ENSRROP00000012238 | Decapping mRNA 1A. | SMG6 nonsense mediated mRNA decay factor. | 0.732 |
DCP1A | SMG7 | ENSRROP00000039598 | ENSRROP00000023868 | Decapping mRNA 1A. | SMG7 nonsense mediated mRNA decay factor. | 0.725 |
DCP1A | UPF2 | ENSRROP00000039598 | ENSRROP00000040630 | Decapping mRNA 1A. | UPF2 regulator of nonsense mediated mRNA decay. | 0.630 |
DCP1A | UPF3A | ENSRROP00000039598 | ENSRROP00000003061 | Decapping mRNA 1A. | UPF3A regulator of nonsense mediated mRNA decay. | 0.561 |
DCP1A | UPF3B | ENSRROP00000039598 | ENSRROP00000035009 | Decapping mRNA 1A. | UPF3B regulator of nonsense mediated mRNA decay. | 0.561 |
DCP1A | ZGRF1 | ENSRROP00000039598 | ENSRROP00000007813 | Decapping mRNA 1A. | DUF2439 domain-containing protein. | 0.757 |
ENSRROP00000039052 | CASC3 | ENSRROP00000039052 | ENSRROP00000005421 | AAA_12 domain-containing protein. | CASC3 exon junction complex subunit. | 0.810 |
page 1 of 6