STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM54Tripartite motif containing 54. (402 aa)    
Predicted Functional Partners:
TTN
Titin.
   
 
 0.694
SPEGNB
SPEG neighbor.
   
 
 0.577
BBOX1
Gamma-butyrobetaine hydroxylase 1.
      
 0.564
NRAP
Nebulin related anchoring protein.
   
 
 0.508
TCAP
Titin-cap.
   
 
 0.485
TRIM52
Tripartite motif containing 52.
      
 0.465
NBR1
NBR1 autophagy cargo receptor.
    
 0.457
UBC
Uncharacterized protein.
   
 0.449
OR52H1
Olfactory receptor.
      
 0.448
CKMT2
Creatine kinase, mitochondrial 2; Belongs to the ATP:guanido phosphotransferase family.
   
 
 0.431
Your Current Organism:
Rhinopithecus roxellana
NCBI taxonomy Id: 61622
Other names: Pygathrix roxellana, R. roxellana, golden snub-nosed monkey
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.