Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FLAD1 | FRMPD1 | ENSRROP00000044311 | ENSRROP00000000790 | FAD synthase; Catalyzes the adenylation of flavin mononucleotide (FMN) to form flavin adenine dinucleotide (FAD) coenzyme. In the C-terminal section; belongs to the PAPS reductase family. FAD1 subfamily. | FERM and PDZ domain containing 1. | 0.564 |
FLAD1 | GCNA | ENSRROP00000044311 | ENSRROP00000044008 | FAD synthase; Catalyzes the adenylation of flavin mononucleotide (FMN) to form flavin adenine dinucleotide (FAD) coenzyme. In the C-terminal section; belongs to the PAPS reductase family. FAD1 subfamily. | Germ cell nuclear acidic peptidase. | 0.514 |
FRMPD1 | FLAD1 | ENSRROP00000000790 | ENSRROP00000044311 | FERM and PDZ domain containing 1. | FAD synthase; Catalyzes the adenylation of flavin mononucleotide (FMN) to form flavin adenine dinucleotide (FAD) coenzyme. In the C-terminal section; belongs to the PAPS reductase family. FAD1 subfamily. | 0.564 |
FRMPD1 | GCNA | ENSRROP00000000790 | ENSRROP00000044008 | FERM and PDZ domain containing 1. | Germ cell nuclear acidic peptidase. | 0.599 |
GCNA | FLAD1 | ENSRROP00000044008 | ENSRROP00000044311 | Germ cell nuclear acidic peptidase. | FAD synthase; Catalyzes the adenylation of flavin mononucleotide (FMN) to form flavin adenine dinucleotide (FAD) coenzyme. In the C-terminal section; belongs to the PAPS reductase family. FAD1 subfamily. | 0.514 |
GCNA | FRMPD1 | ENSRROP00000044008 | ENSRROP00000000790 | Germ cell nuclear acidic peptidase. | FERM and PDZ domain containing 1. | 0.599 |
GCNA | NUF2 | ENSRROP00000044008 | ENSRROP00000011350 | Germ cell nuclear acidic peptidase. | NUF2 component of NDC80 kinetochore complex. | 0.491 |
GCNA | POLR1A | ENSRROP00000044008 | ENSRROP00000014555 | Germ cell nuclear acidic peptidase. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.505 |
GCNA | RRN3 | ENSRROP00000044008 | ENSRROP00000004438 | Germ cell nuclear acidic peptidase. | Uncharacterized protein. | 0.544 |
GCNA | SPRTN | ENSRROP00000044008 | ENSRROP00000040860 | Germ cell nuclear acidic peptidase. | SprT-like N-terminal domain. | 0.618 |
GCNA | SRGAP1 | ENSRROP00000044008 | ENSRROP00000008464 | Germ cell nuclear acidic peptidase. | SLIT-ROBO Rho GTPase activating protein 1. | 0.569 |
GCNA | TAF1D | ENSRROP00000044008 | ENSRROP00000025943 | Germ cell nuclear acidic peptidase. | TATA-box binding protein associated factor, RNA polymerase I subunit D. | 0.729 |
GCNA | TBP | ENSRROP00000044008 | ENSRROP00000026797 | Germ cell nuclear acidic peptidase. | TATA-box binding protein. | 0.487 |
GCNA | USP30 | ENSRROP00000044008 | ENSRROP00000045158 | Germ cell nuclear acidic peptidase. | Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. | 0.568 |
NUF2 | GCNA | ENSRROP00000011350 | ENSRROP00000044008 | NUF2 component of NDC80 kinetochore complex. | Germ cell nuclear acidic peptidase. | 0.491 |
POLR1A | GCNA | ENSRROP00000014555 | ENSRROP00000044008 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Germ cell nuclear acidic peptidase. | 0.505 |
POLR1A | RRN3 | ENSRROP00000014555 | ENSRROP00000004438 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Uncharacterized protein. | 0.996 |
POLR1A | TAF1D | ENSRROP00000014555 | ENSRROP00000025943 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | TATA-box binding protein associated factor, RNA polymerase I subunit D. | 0.564 |
POLR1A | TBP | ENSRROP00000014555 | ENSRROP00000026797 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | TATA-box binding protein. | 0.777 |
RRN3 | GCNA | ENSRROP00000004438 | ENSRROP00000044008 | Uncharacterized protein. | Germ cell nuclear acidic peptidase. | 0.544 |
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