Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BN85302140Hypothetical protein, protein of unknown function DUF1312. (151 aa)    
Predicted Functional Partners:
BN85302150
Predicted heptaprenyl diphosphate synthase, component I.
  
    0.898
abpE
Membrane-associated lipoprotein involved in thiamine biosynthesi; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
       0.796
rpmE
50S ribosomal protein L31; Binds the 23S rRNA; Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily.
       0.520
rnfG
NADH:ubiquinone oxidoreductase, subunit G.
       0.516
rnfE
NADH dehydrogenase (Ubiquinone), RnfE subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
       0.516
rnfA
Electron transport complex, RnfABCDGE type, A subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
       0.516
rnfB
Electron transport complex, RnfABCDGE type, B subunit.
       0.516
rnfC
NADH oxidoreductase complex RnfABCDGE type, C subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily.
       0.502
rnfD
NADH oxidoreductase complex RnfABCDGE type, D subunit.
       0.493
BN85302080
Hypothetical protein, probable electron complex associated.
       0.461
Your Current Organism:
Acholeplasma brassicae
NCBI taxonomy Id: 61635
Other names: A. brassicae, ATCC 49388, strain 0502
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