STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN85302240Hypothetical protein. (204 aa)    
Predicted Functional Partners:
tktA
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
       0.728
mnmG
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.
       0.577
rsmG
Ribosomal RNA small subunit methyltransferase G (16S rRNA 7-methylguanosine methyltransferase); Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
       0.569
nqrF
Na+-transporting ubiquinone oxidoreductase subunit F.
       0.501
parA
Chromosome partitioning protein.
       0.491
spo0J
Stage 0 sporulation protein J; Belongs to the ParB family.
       0.491
nqrB
Na+-transporting ubiquinone oxidoreductase subunit B.
       0.486
nqrC
Na+-transporting ubiquinone oxidoreductase subunit C.
       0.486
nqrD
Na+-transporting ubiquinone oxidoreductase subunit D; Belongs to the NqrDE/RnfAE family.
       0.486
nqrE
Na+-transporting ubiquinone oxidoreductase subunit E; Belongs to the NqrDE/RnfAE family.
       0.486
Your Current Organism:
Acholeplasma brassicae
NCBI taxonomy Id: 61635
Other names: A. brassicae, ATCC 49388, strain 0502
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