STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN85303960Glycoside hydrolase, family 3 protein. (523 aa)    
Predicted Functional Partners:
BN85303820
Beta-lactamase family protein.
  
 0.965
BN85303950
Conserved hypothetical protein.
 
    0.933
BN85314460
Glycosyl hydrolase.
  
  
 
0.916
BN85304020
Glycoside hydrolase, family 20.
    
 0.903
BN85304090
Glycoside hydrolase, family 20.
    
 0.903
BN85306710
Hypothetical protein,containing chitinase domain.
     
 0.903
glmS-2
Glutamine--fructose-6-phosphate transaminase (isomerizing); Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.
 
  
 0.838
BN85303970
ATPase BadF/BadG/BcrA/BcrD type.
 
    0.834
BN85303910
Conserved hypothetical protein.
 
     0.792
BN85303940
Conserved hypothetical protein, DUF624.
       0.781
Your Current Organism:
Acholeplasma brassicae
NCBI taxonomy Id: 61635
Other names: A. brassicae, ATCC 49388, strain 0502
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