Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BN85304100Hypothetical protein. (743 aa)    
Predicted Functional Partners:
BN85316910
Conserved hypothetical protein.
  
     0.727
BN85311820
ABC-type transport system, permease.
  
     0.660
BN85307280
Acholeplasma phage L2 encoded protein (ORF13).
  
     0.598
BN85316200
Diguanylate cyclase/phosphodiesterase with PAS sensor.
  
     0.594
BN85303260
Predicted phospholipid/glycerol acyltransferase.
  
     0.593
BN85304110
Hypothetical protein.
       0.565
BN85304120
Hypothetical protein.
       0.565
BN85304210
Putative carbohydrate ABC transporter-like, substrate-binding component.
 
     0.563
BN85304090
Glycoside hydrolase, family 20.
 
     0.557
BN85304080
Predicted exopolysaccharide biosynthesis protein related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase.
 
     0.556
Your Current Organism:
Acholeplasma brassicae
NCBI taxonomy Id: 61635
Other names: A. brassicae, ATCC 49388, strain 0502
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