STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN85304500Transcriptional regulator, LacI family. (336 aa)    
Predicted Functional Partners:
BN85304510
Conserved hypothetical protein.
 
    0.784
cbp
Cellobiose phosphorylase.
 
  
 0.705
BN85304520
ABC transporter, permease (probably sugar transport).
 
    0.635
BN85304530
ABC transporter, permease.
 
     0.571
pykF-2
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
 
 0.496
BN85300520
Sensor hybrid histidine kinase.
    
 
 0.483
hPr1
Phosphocarrier protein (histidine phosphorylation site; PTS-related).
   
 
 0.474
hPr2
Phosphocarrier protein HPr (serine phosphorylation site), PTS-related.
   
 
 0.474
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
 
 0.450
ribA
Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family. In the N-terminal section; belongs to the DHBP synthase family.
    
   0.440
Your Current Organism:
Acholeplasma brassicae
NCBI taxonomy Id: 61635
Other names: A. brassicae, ATCC 49388, strain 0502
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.