Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BN85304520ABC transporter, permease (probably sugar transport). (311 aa)    
Predicted Functional Partners:
BN85304530
ABC transporter, permease.
  0.993
BN85304510
Conserved hypothetical protein.
 
  0.984
BN85313830
ABC transporter, ATPase component; Belongs to the ABC transporter superfamily.
 
  0.948
BN85308480
Carbohydrate ABC transporter, ATPase component; Belongs to the ABC transporter superfamily.
 
  0.946
BN85304630
Binding-protein-dependent transport systems inner membrane component.
 
  
 
0.935
BN85304590
Putative sugar ABC transporter, membrane component.
 
  
 
0.932
malK
ABC-type sugar transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
  0.920
cbp
Cellobiose phosphorylase.
 
     0.840
BN85302840
ABC transporter, permease protein.
 
   0.836
BN85314470
Putative ABC-type sugar transport system, permease.
 
   0.824
Your Current Organism:
Acholeplasma brassicae
NCBI taxonomy Id: 61635
Other names: A. brassicae, ATCC 49388, strain 0502
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