STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN85304530ABC transporter, permease. (283 aa)    
Predicted Functional Partners:
BN85304520
ABC transporter, permease (probably sugar transport).
   0.970
BN85304570
Putative sugar ABC transporter, binding subunit.
  
  0.951
BN85304600
Putative sugar ABC transporter, permease.
 
  
 
0.939
BN85304640
Binding-protein-dependent transport systems inner membrane component.
 
  
 
0.936
BN85304510
Conserved hypothetical protein.
 
   0.897
BN85314480
ABC-type sugar transport system, permease component.
 
   0.864
BN85300960
ABC-type carbohydrate transport system, permease component.
  
   0.862
ugpA
ABC-type sugar transport systems, permease component.
 
   0.862
BN85316940
ABC-type transport system, permease component.
  
   0.859
BN85313830
ABC transporter, ATPase component; Belongs to the ABC transporter superfamily.
 
 
 0.858
Your Current Organism:
Acholeplasma brassicae
NCBI taxonomy Id: 61635
Other names: A. brassicae, ATCC 49388, strain 0502
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.