STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN85304580Putative sugar ABC transporter, extracellular solute-binding protein family 1. (993 aa)    
Predicted Functional Partners:
BN85304590
Putative sugar ABC transporter, membrane component.
 
   0.962
BN85304610
Conserved hypothetical protein.
 
    0.949
BN85304600
Putative sugar ABC transporter, permease.
 
   0.936
BN85304570
Putative sugar ABC transporter, binding subunit.
 
     0.925
BN85304620
Conserved hypothetical protein.
 
     0.901
BN85304630
Binding-protein-dependent transport systems inner membrane component.
 
   0.899
BN85307970
Sugar ABC transporter permease.
 
   0.845
BN85303870
Carbohydrate ABC transporter-like, permease.
 
   0.838
BN85304140
ABC-type sugar transport system, permease component.
 
   0.837
BN85304190
Putative carbohydrate ABC transporter-like,permease.
 
   0.793
Your Current Organism:
Acholeplasma brassicae
NCBI taxonomy Id: 61635
Other names: A. brassicae, ATCC 49388, strain 0502
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.