Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BN85304590Putative sugar ABC transporter, membrane component. (308 aa)    
Predicted Functional Partners:
BN85304630
Binding-protein-dependent transport systems inner membrane component.
 
  
 
0.968
BN85304600
Putative sugar ABC transporter, permease.
 
   0.964
BN85304580
Putative sugar ABC transporter, extracellular solute-binding protein family 1.
 
   0.962
BN85304610
Conserved hypothetical protein.
 
    0.944
BN85304520
ABC transporter, permease (probably sugar transport).
 
  
 
0.932
BN85304570
Putative sugar ABC transporter, binding subunit.
 
   0.925
BN85304640
Binding-protein-dependent transport systems inner membrane component.
 
   0.914
BN85304620
Conserved hypothetical protein.
 
     0.892
BN85307980
ABC-type sugar transport system, permease component.
 
   0.850
BN85303880
ABC transporter-like, permease.
 
   0.848
Your Current Organism:
Acholeplasma brassicae
NCBI taxonomy Id: 61635
Other names: A. brassicae, ATCC 49388, strain 0502
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