Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BN85306170Conserved hypothetical protein. (421 aa)    
Predicted Functional Partners:
BN85300520
Sensor hybrid histidine kinase.
  
 
 0.832
BN85306190
Probable galanin protein.
 
     0.803
BN85305950
Exonuclease domain protein.
 
    0.781
fur
Predicted ferric uptake regulator; Belongs to the Fur family.
  
     0.774
BN85303850
ABC-like transport system, substrate binding protein.
  
     0.773
BN85309100
Conserved hypothetical protein (UPF0283).
  
     0.773
BN85309430
Conserved hypothetical protein (DUF2357).
  
     0.773
BN85314400
Conserved hypothetical protein.
  
     0.773
BN85303830
Ig-like domain surface-anchored protein with predicted N-acetylmuramoyl-L-alanine amidase activity.
 
     0.771
BN85308840
Conserved hypothetical protein.
  
     0.770
Your Current Organism:
Acholeplasma brassicae
NCBI taxonomy Id: 61635
Other names: A. brassicae, ATCC 49388, strain 0502
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