Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
BN85306540(De)hydratase, contains MaoC-like domain. (135 aa)    
Predicted Functional Partners:
BN85306550
Acyl-coa dehydrogenase, short-chain specific.
 
 0.942
BN85311920
Phosphate butyryltransferase.
 
   
 0.925
BN85306570
Electron transfer flavoprotein alpha subunit.
  
 
 0.830
BN85306560
Electron transfer flavoprotein, beta subunit.
  
 
 0.812
atoB
Acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.704
nifJ
Pyruvate-flavodoxin oxidoreductase.
  
  
 0.632
ADH2
Aldehyde-alcohol dehydrogenase 2; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
  
 0.490
BN85306530
Transcriptional regulator, TetR family).
 
   
 0.485
birA
Biotin-[acetyl-CoA-carboxylase] ligase, pat A.
  
  
 0.467
BN85306580
Hypothetical protein.
       0.460
Your Current Organism:
Acholeplasma brassicae
NCBI taxonomy Id: 61635
Other names: A. brassicae, ATCC 49388, strain 0502
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