STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN8530677Type I phosphodiesterase/nucleotide pyrophosphatase. (368 aa)    
Predicted Functional Partners:
BN85306760
3-demethylubiquinone-9 3-O-methyltransferase.
       0.553
BN85304660
Hypothetical protein, contains bacterial Ig-like and carbohydrate-binding domain.
  
  
 0.457
BN85301700
Predicted cytochrome C biogenesis protein transmembrane region.
  
     0.452
BN85306790
Predicte haloacid dehalogenase-like hydrolase.
       0.419
BN85306780
Hydrolase, NUDIX family protein.
       0.415
Your Current Organism:
Acholeplasma brassicae
NCBI taxonomy Id: 61635
Other names: A. brassicae, ATCC 49388, strain 0502
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.