Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BN8530677Type I phosphodiesterase/nucleotide pyrophosphatase. (368 aa)    
Predicted Functional Partners:
BN85306760
3-demethylubiquinone-9 3-O-methyltransferase.
       0.552
BN85301700
Predicted cytochrome C biogenesis protein transmembrane region.
  
     0.452
BN85306790
Predicte haloacid dehalogenase-like hydrolase.
       0.419
BN85306780
Hydrolase, NUDIX family protein.
       0.415
Your Current Organism:
Acholeplasma brassicae
NCBI taxonomy Id: 61635
Other names: A. brassicae, ATCC 49388, strain 0502
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