STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN85306830Alpha amylase, catalytic domain protein. (501 aa)    
Predicted Functional Partners:
amyA
Alpha-amylase; Belongs to the glycosyl hydrolase 13 family.
 
  
 
0.964
pulA
Pullulanase, type I; Belongs to the glycosyl hydrolase 13 family.
 
 0.944
BN85306850
Pullulanase, surface-anchored protein; Belongs to the glycosyl hydrolase 13 family.
 
 0.944
glgB
Glycogen (1,4-alpha-glucan) branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position. Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
 
 0.930
BN85304680
Similar to alpha amylase.
  
  
 
0.928
BN85305640
Oligo-1,6-glucosidase.
  
  
 
0.927
amyA-2
Putative alpha amylase.
  
  
 
0.926
glgP
Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 0.923
BN85314220
Putative alpha amylase.
  
  
 
0.923
BN85306840
Conserved hypothetical protein.
       0.773
Your Current Organism:
Acholeplasma brassicae
NCBI taxonomy Id: 61635
Other names: A. brassicae, ATCC 49388, strain 0502
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