Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BN85307990Conserved hypothetical protein. (678 aa)    
Predicted Functional Partners:
BN85308000
Conserved hypothetical protein.
 
    0.949
BN85307960
ABC transporter (sugar), periplasmic component.
 
    0.948
BN85307970
Sugar ABC transporter permease.
 
    0.946
BN85307980
ABC-type sugar transport system, permease component.
 
    0.886
BN85308020
ABC transporter, permease protein.
 
    0.856
BN85307950
ABC transporter (sugar), periplasmic component.
 
    0.825
BN85308010
Binding-protein-dependent transport systems inner membrane component.
 
    0.807
BN85303910
Conserved hypothetical protein.
 
    0.785
BN85304180
Conserved hypothetical protein.
 
    0.785
BN85304620
Conserved hypothetical protein.
 
    0.785
Your Current Organism:
Acholeplasma brassicae
NCBI taxonomy Id: 61635
Other names: A. brassicae, ATCC 49388, strain 0502
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