Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
BN85308010Binding-protein-dependent transport systems inner membrane component. (358 aa)    
Predicted Functional Partners:
BN85307970
Sugar ABC transporter permease.
 
  
  0.994
BN85307980
ABC-type sugar transport system, permease component.
 
   0.964
BN85308020
ABC transporter, permease protein.
 
   0.964
BN85306890
Putative polysaccharid ABC-type transport system, permease component.
 
 
 0.896
BN85307960
ABC transporter (sugar), periplasmic component.
 
   0.869
BN85303930
ABC transporter, permease component.
 
   0.848
BN85304200
Putative carbohydrate ABC transporter-like, permease.
 
   0.848
BN85304600
Putative sugar ABC transporter, permease.
 
   0.848
BN85304640
Binding-protein-dependent transport systems inner membrane component.
 
   0.848
BN85302840
ABC transporter, permease protein.
 
   0.846
Your Current Organism:
Acholeplasma brassicae
NCBI taxonomy Id: 61635
Other names: A. brassicae, ATCC 49388, strain 0502
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