Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
BN85309570Amino acid ABC transporter, permease. (223 aa)    
Predicted Functional Partners:
BN85309560
Amino acid ABC transporter, ATPase.
 0.999
BN85309580
Amino acid ABC transporter, substrate-binding component; Belongs to the bacterial solute-binding protein 3 family.
 0.999
BN85305670
Putative amino acid ABC transporter subunit.
 
 0.980
BN85311480
Amino acid ABC superfamily, ATP binding.
 
 0.966
BN85305690
Amino acid ABC transporter, ATP-binding protein.
 
 0.962
BN85301120
Similar to amino acid ABC transporter, ATP-binding protein).
  
 
 0.642
BN85309550
Hypothetical protein.
       0.531
BN85311470
Amino acid ABC transporter, permease protein (His/Glu/Gln/Arg/opine family).
  
  
 
0.499
malK
ABC-type sugar transport system, ATPase component; Belongs to the ABC transporter superfamily.
   
 0.446
potA
ABC spermidine/putrescine transporter, ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
 
 
 0.444
Your Current Organism:
Acholeplasma brassicae
NCBI taxonomy Id: 61635
Other names: A. brassicae, ATCC 49388, strain 0502
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