Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
znuC-2ABC-type Mn/Zn transport system, ATPase component. (244 aa)    
Predicted Functional Partners:
znuB-2
ABC-type Mn2+/Zn2+ transport systems, permease component.
 
 0.997
znuB-3
ABC-type Mn2+/Zn2+ transport systems, permease component.
 
 0.997
znuA-2
ABC-type metal ion transport system, periplasmic componen; Belongs to the bacterial solute-binding protein 9 family.
 
 
 0.995
znuB
ABC-type Mn2+/Zn2+ transport systems, permease component.
 
 
 0.925
znuA
ABC-type Mn2+/Zn2+ transport system, periplasmic component.
 
  
 0.770
troR
Putative Mn-dependent transcriptional regulator.
 
  
 0.748
BN85311590
ABC transporter, permease and ATPase components.
 
     
0.656
potB
Putative spermidine/putrescine transport system permease protein PotB.
      
 0.644
potB-2
Spermidine/putrescine transport system permease.
      
 0.644
BN85312830
ABC transporter, permease and ATPse components.
 
     
0.589
Your Current Organism:
Acholeplasma brassicae
NCBI taxonomy Id: 61635
Other names: A. brassicae, ATCC 49388, strain 0502
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