Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BN85314830Diguanylate cyclase. (373 aa)    
Predicted Functional Partners:
BN85309500
Diguanylate cyclase/phosphodiesterase.
 
 
 0.857
BN85309510
Diguanylate cyclase/phosphodiesterase.
 
 
 0.835
BN85315070
Diguanylate phosphodiesterase.
 
 
 0.820
BN85304480
EAL domain-containing protein; Conserved hypothetical protein, contains diguanylate cyclase and diguanylate phosphodiesterase domains.
 
    0.806
BN85312060
Predicted diguanylate cyclase and metal dependent phosphohydrolase.
 
 
 0.804
BN85312580
Predicted diguanylate cyclase.
 
   0.795
BN85313100
Diguanylate cyclase/phosphodiesterase.
 
   0.794
BN85300520
Sensor hybrid histidine kinase.
 
  
 0.734
BN85300510
Response regulator receiver modulated metal dependent phosphohydrolase.
  
    0.573
BN85315080
Diguanylate cyclase with PAS/PAC sensor.
 
 
 
0.483
Your Current Organism:
Acholeplasma brassicae
NCBI taxonomy Id: 61635
Other names: A. brassicae, ATCC 49388, strain 0502
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